RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 IRAK4Q9NWZ3 460 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 SNX5Q9Y5X3 404 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 CRB1P82279 1406 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 AARSP49588 968 aaKnown RBP eCLIP16.94■□□□□ 0.3
COL2A1-202ENST00000380518 HSD17B4P51659 736 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 MAPRE2Q15555 327 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 NAB2Q15742 525 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 LRRC23Q53EV4 343 aaPredicted RBP16.94■□□□□ 0.3
COL2A1-202ENST00000380518 LRIG3Q6UXM1 1119 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 PARP9Q8IXQ6 854 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 ARL2BPQ9Y2Y0 163 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 CCNI2Q6ZMN8 369 aaPredicted RBP16.94■□□□□ 0.3
COL2A1-202ENST00000380518 LPAR1Q92633 364 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 EPAS1Q99814 870 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 CYP4F11Q9HBI6 524 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 CLTCL1P53675 1640 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 ALKQ9UM73 1620 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 ANTXR2P58335 489 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 OCA2Q04671 838 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 BTBD8Q5XKL5 378 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 MTHFD1LQ6UB35 978 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 ZNF526Q8TF50 670 aaPredicted RBP16.94■□□□□ 0.3
COL2A1-202ENST00000380518 CRAMP1Q96RY5 1269 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 MMTAG2Q9BU76 263 aaKnown RBP16.94■□□□□ 0.3
COL2A1-202ENST00000380518 SYCE1LA8MT33 242 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 ACTN3Q08043 901 aaPredicted RBP16.94■□□□□ 0.3
COL2A1-202ENST00000380518 MXD4Q14582 209 aaPredicted RBP16.94■□□□□ 0.3
COL2A1-202ENST00000380518 USP49Q70CQ1 688 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 KCNV2Q8TDN2 545 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 MS4A14Q96JA4 679 aa16.94■□□□□ 0.3
COL2A1-202ENST00000380518 KCNQ2O43526 872 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 ESRRBO95718 433 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 CYP2C19P33261 490 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 NNMTP40261 264 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 SERPINB4P48594 390 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 HMGCS2P54868 508 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 COG2Q14746 738 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 STRIP1Q5VSL9 837 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 ZNF34Q8IZ26 560 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 RBM15Q96T37 977 aaKnown RBP eCLIP16.93■□□□□ 0.3
COL2A1-202ENST00000380518 EGFL8Q99944 293 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 SENP7Q9BQF6 1050 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 TEX13BQ9BXU2 312 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 ZNF212Q9UDV6 495 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 HNRNPCL1O60812 293 aaKnown RBP16.93■□□□□ 0.3
COL2A1-202ENST00000380518 HADHAP40939 763 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 RAD9BQ6WBX8 426 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 TCP11X1B4DZS4 312 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 SNRNP35Q16560 246 aaKnown RBP16.93■□□□□ 0.3
COL2A1-202ENST00000380518 SLC30A5Q8TAD4 765 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 ASIC4Q96FT7 647 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 ZBED2Q9BTP6 218 aa16.93■□□□□ 0.3
COL2A1-202ENST00000380518 ZCCHC11Q5TAX3 1644 aaKnown RBP16.92■□□□□ 0.3
COL2A1-202ENST00000380518 STXBP3O00186 592 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 AP3B1O00203 1094 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 MEFVO15553 781 aaPredicted RBP16.92■□□□□ 0.3
COL2A1-202ENST00000380518 PDHA1P08559 390 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 RAD23BP54727 409 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 TTC23LQ6PF05 361 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 ANKMY2Q8IV38 441 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 ASPSCR1Q9BZE9 553 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 FOXP3Q9BZS1 431 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 EPN3Q9H201 632 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 TXNP10599 105 aaKnown RBP16.92■□□□□ 0.3
COL2A1-202ENST00000380518 PDGFRAP16234 1089 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 KCTD17Q8N5Z5 321 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 CEP70Q8NHQ1 597 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 SLC26A7Q8TE54 656 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 RMDN2Q96LZ7 410 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 MAP3K14Q99558 947 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 TRIM51Q9BSJ1 452 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 TRIM54Q9BYV2 358 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 A0A1W2PQJ5 194 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 UBA6A0AVT1 1052 aaPredicted RBP16.92■□□□□ 0.3
COL2A1-202ENST00000380518 ATP9BO43861 1147 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 ENTPD3O75355 529 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 SSTR3P32745 418 aaPredicted RBP16.92■□□□□ 0.3
COL2A1-202ENST00000380518 SESN2P58004 480 aaPredicted RBP16.92■□□□□ 0.3
COL2A1-202ENST00000380518 RBP5P82980 135 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 FOXD4Q12950 439 aaPredicted RBP16.92■□□□□ 0.3
COL2A1-202ENST00000380518 ZNF235Q14590 738 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 ELMOD1Q8N336 334 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 YY1AP1Q9H869 796 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 PPCSQ9HAB8 311 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 SCHIP1Q9P0W5 487 aaPredicted RBP16.92■□□□□ 0.3
COL2A1-202ENST00000380518 AGAP1Q9UPQ3 857 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 AFF2P51816 1311 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 NEMP1O14524 444 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 KCNN4O15554 427 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 MYCP01106 439 aaPredicted RBP16.92■□□□□ 0.3
COL2A1-202ENST00000380518 ACOT2P49753 483 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 NCOA4Q13772 614 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 FASTKD5Q7L8L6 764 aaKnown RBP16.92■□□□□ 0.3
COL2A1-202ENST00000380518 RNF135Q8IUD6 432 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 MKNK1Q9BUB5 465 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 FHOD1Q9Y613 1164 aa16.92■□□□□ 0.3
COL2A1-202ENST00000380518 PSMD14O00487 310 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 LCP1P13796 627 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 RAD51Q06609 339 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 BAATQ14032 418 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms