RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 PHTF1Q9UMS5 762 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 ABCC1P33527 1531 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 ZNF844Q08AG5 666 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 ANKRD40Q6AI12 368 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 PCIF1Q9H4Z3 704 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 MPP6Q9NZW5 540 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 CTNNAL1Q9UBT7 734 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 SRRM3A6NNA2 597 aaPredicted RBP11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 POLGP54098 1239 aaPredicted RBP11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 ZNF554Q86TJ5 538 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 AGAP11Q8TF27 550 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 SCN3BQ9NY72 215 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 A0A1W2PQJ5 194 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 TTLL1O95922 423 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 PAMP19021 973 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 ZBTB49Q6ZSB9 765 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 ERICH1Q86X53 443 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 CCDC60Q8IWA6 550 aaPredicted RBP11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 IL17REQ8NFR9 667 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 FHDC1Q9C0D6 1143 aaPredicted RBP11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 WHRNQ9P202 907 aa11.02□□□□□ -0.64
CCDC85C-201ENST00000380243 LINC00854A0A1B0GVQ3 168 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 CDK17Q00537 523 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 ROR1Q01973 937 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 LRRC39Q96DD0 335 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 CPSF3Q9UKF6 684 aaKnown RBP11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 SAC3D1A6NKF1 404 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 TRIM24O15164 1050 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 RASSF9O75901 435 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 CIITAP33076 1130 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 IL12RB1P42701 662 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 CTSWP56202 376 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 MTHFD1LQ6UB35 978 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 FRMD5Q7Z6J6 570 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 THRAP3Q9Y2W1 955 aaKnown RBP11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 IQGAP2Q13576 1575 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 RIMBP2O15034 1052 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 ENO3P13929 434 aaPredicted RBP11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 JAK1P23458 1154 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 ANGPTL8Q6UXH0 198 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 PRCCQ92733 491 aaPredicted RBP11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 PPP1R36Q96LQ0 422 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 PSMA4P25789 261 aaKnown RBP11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 EIF2S1P05198 315 aaKnown RBP11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 ITFG2Q969R8 447 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 E2F7Q96AV8 911 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 PLGRKTQ9HBL7 147 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 ALBP02768 609 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 CHRNA2Q15822 529 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 ADSSL1Q8N142 457 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 PARD3BQ8TEW8 1205 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 CCDC28BQ9BUN5 200 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 TEKT3Q9BXF9 490 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 MBD2Q9UBB5 411 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 EFHC1Q5JVL4 640 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 TRIM8Q9BZR9 551 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 IPPQ9Y573 584 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 RTN3O95197 1032 aaPredicted RBP11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 TNFAIP8O95379 198 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 IL2RBP14784 551 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 ZNF200P98182 395 aaPredicted RBP11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 PTK7Q13308 1070 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 EGFL6Q8IUX8 553 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 MSL3Q8N5Y2 521 aaKnown RBP11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 INPP5FQ9Y2H2 1132 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 CLDN3O15551 220 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 USP1O94782 785 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 ADD2P35612 726 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 DCUN1D5Q9BTE7 237 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 KIF21AQ7Z4S6 1674 aa11.02□□□□□ -0.65
CCDC85C-201ENST00000380243 PDZK1P1A8MUH7 402 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 DGKIO75912 1065 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 ITGA8P53708 1063 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 DNAJC3Q13217 504 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 ITGB3BPQ13352 177 aaPredicted RBP11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 SDR42E1Q8WUS8 393 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 MMADHCQ9H3L0 296 aaPredicted RBP11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 HACD3Q9P035 362 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 ZHX2Q9Y6X8 837 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 A0A087WXM4 84 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 NDNQ99608 321 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 ASNSD1Q9NWL6 643 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 LOC100653049A0A140TA62 436 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 AP3B1O00203 1094 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 KRT34O76011 436 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 ATP6V1E1P36543 226 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 PEX5P50542 639 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 ARMC4Q5T2S8 1044 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 C9orf72Q96LT7 481 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 MTA3Q9BTC8 594 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 GPBP1L1Q9HC44 474 aaPredicted RBP11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 NCOA3Q9Y6Q9 1424 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 SLC16A3O15427 465 aaKnown RBP11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 DEPDC7Q96QD5 511 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 C1orf232A0A0U1RR37 186 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 KIF28PB7ZC32 967 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 PHGDHO43175 533 aaKnown RBP11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 CLEC4GQ6UXB4 293 aa11.01□□□□□ -0.65
CCDC85C-201ENST00000380243 PRUNE1Q86TP1 453 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms