RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 GBP5Q96PP8 586 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 NUDCD1Q96RS6 583 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 DDX4Q9NQI0 724 aaKnown RBP12.11□□□□□ -0.47
SMAD9-202ENST00000379826 ADAM22Q9P0K1 906 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 PFASO15067 1338 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 CCDC195A0A1B0GUA6 201 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 DENND3A2RUS2 1198 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 CALCAP01258 141 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 PAX7P23759 505 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 PDIA2Q13087 525 aaKnown RBP12.11□□□□□ -0.47
SMAD9-202ENST00000379826 CASC4Q6P4E1 433 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 TTC17Q96AE7 1141 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 ERVK-5Q9HDB9 667 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 LAMB4A4D0S4 1761 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 ZNF142P52746 1687 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-202ENST00000379826 TISP43B9A030 160 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 CES2O00748 559 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 EIF3DO15371 548 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMAD9-202ENST00000379826 POLGP54098 1239 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-202ENST00000379826 NPEPPSP55786 919 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 TAF1CQ15572 869 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-202ENST00000379826 CFAP157Q5JU67 520 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 TRMT10CQ7L0Y3 403 aaKnown RBP12.11□□□□□ -0.47
SMAD9-202ENST00000379826 HAUS6Q7Z4H7 955 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 KRT35Q92764 455 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 ACSF2Q96CM8 615 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-202ENST00000379826 NPHS2Q9NP85 383 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 NUP188Q5SRE5 1749 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 ENO4A6NNW6 628 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 MARCKSL1P49006 195 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 CAPRIN2Q6IMN6 1127 aaKnown RBP12.11□□□□□ -0.47
SMAD9-202ENST00000379826 PIK3R5Q8WYR1 880 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 TATDN2Q93075 761 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 TRIM11Q96F44 468 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 ACP6Q9NPH0 428 aa12.11□□□□□ -0.47
SMAD9-202ENST00000379826 DCTN3O75935 186 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 POLE2P56282 527 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 MTERF2Q49AM1 385 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 SLC10A5Q5PT55 438 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 PDCD7Q8N8D1 485 aaKnown RBP12.1□□□□□ -0.47
SMAD9-202ENST00000379826 PYROXD1Q8WU10 500 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 PYGMP11217 842 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 LMNB2Q03252 620 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 MTMR1Q13613 665 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 MDH1BQ5I0G3 518 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 KRT39Q6A163 491 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 APOBEC3FQ8IUX4 373 aaKnown RBP12.1□□□□□ -0.47
SMAD9-202ENST00000379826 ASTN1O14525 1302 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 FOXO6A8MYZ6 492 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 PPP1R11O60927 126 aaPredicted RBP12.1□□□□□ -0.47
SMAD9-202ENST00000379826 DLG4P78352 724 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 IRX4P78413 519 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 DNAJC24Q6P3W2 148 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 ATP8B4Q8TF62 1192 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 SCFD2Q8WU76 684 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 HSPH1Q92598 858 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 CYTH2Q99418 400 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 TRABDQ9H4I3 376 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 TRAF3IP3Q9Y228 551 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 DCCP43146 1447 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 MYH2Q9UKX2 1941 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 INHBAP08476 426 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 DRD4P21917 467 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 ARSEP51690 589 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 PLA2G4FQ68DD2 849 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 KCNV1Q6PIU1 500 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 YTHDF3Q7Z739 585 aaKnown RBP12.1□□□□□ -0.47
SMAD9-202ENST00000379826 ZC3H18Q86VM9 953 aaKnown RBP12.1□□□□□ -0.47
SMAD9-202ENST00000379826 RBM15Q96T37 977 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMAD9-202ENST00000379826 TRAIPQ9BWF2 469 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 SEL1LQ9UBV2 794 aa12.1□□□□□ -0.47
SMAD9-202ENST00000379826 CFAP69A5D8W1 941 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 M0R2N6 131 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 EML1O00423 815 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 TBX3O15119 743 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 MT-ND3P03897 115 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 DNAJC3Q13217 504 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 KCTD2Q14681 263 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 AOC3Q16853 763 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 CENPUQ71F23 418 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 CBWD1Q9BRT8 395 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 RAVER2Q9HCJ3 691 aaKnown RBP12.09□□□□□ -0.47
SMAD9-202ENST00000379826 UBN1Q9NPG3 1134 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 BAZ2AQ9UIF9 1905 aaKnown RBP12.09□□□□□ -0.47
SMAD9-202ENST00000379826 TLR3O15455 904 aaKnown RBP12.09□□□□□ -0.47
SMAD9-202ENST00000379826 COBLL1Q53SF7 1204 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 ARSHQ5FYA8 562 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 ARHGAP24Q8N264 748 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 KLF6Q99612 283 aaPredicted RBP12.09□□□□□ -0.47
SMAD9-202ENST00000379826 TRIM4Q9C037 500 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 MRPL47Q9HD33 250 aaKnown RBP12.09□□□□□ -0.47
SMAD9-202ENST00000379826 PRR12Q9ULL5 1215 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 ITIH2P19823 946 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 YWHABP31946 246 aaKnown RBP12.09□□□□□ -0.47
SMAD9-202ENST00000379826 OSTNP61366 133 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 TGFB2P61812 414 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 HAO1Q9UJM8 370 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 MAD1L1Q9Y6D9 718 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 OPHN1O60890 802 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 SHMT1P34896 483 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms