RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 EMILIN3Q9NT22 766 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 AIPL1Q9NZN9 384 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 TRIM17Q9Y577 477 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 SMNDC1O75940 238 aaKnown RBP eCLIP7.92□□□□□ -1.142e-7■■■□□ 18.1
GPCPD1-201ENST00000379019 TOP3BO95985 862 aaKnown RBP7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 HMGCRP04035 888 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 F7P08709 466 aaPredicted RBP7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 TSPY3P0CV98 308 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 TSPY8P0CW00 308 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 ETS1P14921 441 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 PPP2R2AP63151 447 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 GPATCH4Q5T3I0 446 aaKnown RBP7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 RDH13Q8NBN7 331 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 REEP2Q9BRK0 252 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 LZTS2Q9BRK4 669 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 JMJD4Q9H9V9 463 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 CBX6O95503 412 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 KRT83P78385 493 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 CNGA2Q16280 664 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 BTNL9Q6UXG8 535 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 PTPRN2Q92932 1015 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 XPO6Q96QU8 1125 aaKnown RBP7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 GPCPD1Q9NPB8 672 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 TBK1Q9UHD2 729 aa7.92□□□□□ -1.14
GPCPD1-201ENST00000379019 E5RJQ4 531 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 TNPO2O14787 897 aaKnown RBP7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 ALADP13716 330 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 LACTB2Q53H82 288 aaPredicted RBP7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 MFSD14CQ5VZR4 134 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 TXNRD3NBQ6F5E7 133 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 AGGF1Q8N302 714 aaeCLIP7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 RASGEF1CQ8N431 466 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 CD99L2Q8TCZ2 262 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 RAET1EQ8TD07 263 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 ZIC5Q96T25 663 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 CTDP1Q9Y5B0 961 aaPredicted RBP7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 MPHOSPH10O00566 681 aaKnown RBP7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 ZSCAN5DPP0CG00 497 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 CYLC1P35663 651 aaPredicted RBP7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 PEX5P50542 639 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 HMGCS2P54868 508 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 EFTUD2Q15029 972 aaKnown RBP eCLIP7.91□□□□□ -1.141e-6■■■■■ 27.8
GPCPD1-201ENST00000379019 PPP2R5BQ15173 497 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 PPP1R7Q15435 360 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 C11orf91Q3C1V1 193 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 ATP13A4Q4VNC1 1196 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 ALS2CLQ60I27 953 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 MIS18BP1Q6P0N0 1132 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 DHX38Q92620 1227 aaKnown RBP7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 ZNF333Q96JL9 665 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 MTMR4Q9NYA4 1195 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 MEIS2O14770 477 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 PPFIA2O75334 1257 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 GIT2Q14161 759 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 COL13A1Q5TAT6 717 aaPredicted RBP7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 NSMFQ6X4W1 530 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 DSTYKQ6XUX3 929 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 TTC7BQ86TV6 843 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 FAM129AQ9BZQ8 928 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 PRKAG3Q9UGI9 489 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 CEP131Q9UPN4 1083 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 IVNS1ABPQ9Y6Y0 642 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 DCHS1Q96JQ0 3298 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 A0A1B0GTW7 788 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 FOXN3O00409 490 aaPredicted RBP7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 HSF2BPO75031 334 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 SOX10P56693 466 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 ALKBH5Q6P6C2 394 aaKnown RBP7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 GBP6Q6ZN66 633 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 EPM2AIP1Q7L775 607 aaPredicted RBP7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 DAW1Q8N136 415 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 USP6NLQ92738 828 aa7.91□□□□□ -1.14
GPCPD1-201ENST00000379019 ERICH2A1L162 156 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 CHUKO15111 745 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 DDAH1O94760 285 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 MMEP08473 750 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 ZYXQ15942 572 aaKnown RBP7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 ASPRV1Q53RT3 343 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 RAB6CQ53S08 254 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 MORN1Q5T089 497 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 RFX8Q6ZV50 586 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 UNC13DQ70J99 1090 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 RAB6CQ9H0N0 254 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 RPAP3Q9H6T3 665 aaPredicted RBP7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 EURLQ9NYK6 297 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 CHKBQ9Y259 395 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 TACC1O75410 805 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 GNAZP19086 355 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 HOXA13P31271 388 aaPredicted RBP7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 INHBCP55103 352 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 CTC1Q2NKJ3 1217 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 DLK2Q6UY11 383 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 SFR1Q86XK3 245 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 SNX29Q8TEQ0 813 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 STK38LQ9Y2H1 464 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 SNX3O60493 162 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 ACSL3O95573 720 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 CALM1P0DP23 149 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 CALM2P0DP24 149 aa7.9□□□□□ -1.14
GPCPD1-201ENST00000379019 CALM3P0DP25 149 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms