RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 SLC5A5Q92911 643 aa16.92■□□□□ 0.3
CKAP4-201ENST00000378026 HERPUD2Q9BSE4 406 aa16.92■□□□□ 0.3
CKAP4-201ENST00000378026 GRID1Q9ULK0 1009 aa16.92■□□□□ 0.3
CKAP4-201ENST00000378026 ATF5Q9Y2D1 282 aaPredicted RBP16.92■□□□□ 0.3
CKAP4-201ENST00000378026 EML1O00423 815 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 NPTXRO95502 500 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 CALCAP01258 141 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 OVGP1Q12889 678 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 NFIXQ14938 502 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 RHBDF2Q6PJF5 856 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 ZNF804AQ7Z570 1209 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 CCDC77Q9BR77 488 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 ZFP69BQ9UJL9 534 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 EMSYQ7Z589 1322 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 FAM86B1E9PN63 330 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 CYP26A1O43174 497 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 RTN3O95197 1032 aaPredicted RBP16.91■□□□□ 0.3
CKAP4-201ENST00000378026 FAM86B2P0C5J1 330 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 RRM1P23921 792 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 GJC1P36383 396 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 TRAF1Q13077 416 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 QRICH1Q2TAL8 776 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 SNX30Q5VWJ9 437 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 GALNT15Q8N3T1 639 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 C7orf43Q8WVR3 580 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 ANKRD27Q96NW4 1050 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 DDX50Q9BQ39 737 aaKnown RBP16.91■□□□□ 0.3
CKAP4-201ENST00000378026 VCXQ9H320 206 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 LRRC19Q9H756 370 aa16.91■□□□□ 0.3
CKAP4-201ENST00000378026 R3HDM2Q9Y2K5 976 aaKnown RBP16.91■□□□□ 0.3
CKAP4-201ENST00000378026 EXOC1LA0A1B0GW35 172 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 ATP9AO75110 1047 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 PIAS1O75925 651 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 DCTN3O75935 186 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 KRT36O76013 467 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 ACADSP16219 412 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 CA4P22748 312 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 RPA3P35244 121 aaPredicted RBP16.9■□□□□ 0.3
CKAP4-201ENST00000378026 BMT2Q1RMZ1 405 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 C2CD6Q53TS8 623 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 SCG3Q8WXD2 468 aaKnown RBP16.9■□□□□ 0.3
CKAP4-201ENST00000378026 CD101Q93033 1021 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 SRP68Q9UHB9 627 aaKnown RBP16.9■□□□□ 0.3
CKAP4-201ENST00000378026 STARD13Q9Y3M8 1113 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 ADGRA3Q8IWK6 1321 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 IVDP26440 423 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 CNGA1P29973 690 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 NT5C2P49902 561 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 LAMB3Q13751 1172 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 TBC1D10BQ4KMP7 808 aaPredicted RBP16.9■□□□□ 0.3
CKAP4-201ENST00000378026 NOP9Q86U38 636 aaKnown RBP16.9■□□□□ 0.3
CKAP4-201ENST00000378026 SLC47A2Q86VL8 602 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 CCNJLQ8IV13 435 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 ETNPPLQ8TBG4 499 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 EIF2AK1Q9BQI3 630 aaKnown RBP16.9■□□□□ 0.3
CKAP4-201ENST00000378026 AGPAT3Q9NRZ7 376 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 SLAIN2Q9P270 581 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 WDR35Q9P2L0 1181 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 SCOCQ9UIL1 159 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 SUGT1Q9Y2Z0 365 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 GPR75-ASB3A0A0A6YYF3 556 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 ASMTLO95671 621 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 MARK3P27448 753 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 ZNF76P36508 570 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 RASSF2P50749 326 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 CDR2Q01850 454 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 PKN2Q16513 984 aaKnown RBP16.9■□□□□ 0.3
CKAP4-201ENST00000378026 CCDC125Q86Z20 511 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 FAM178BQ8IXR5 827 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 INPP5DQ92835 1189 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 ZNF333Q96JL9 665 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 DCLRE1BQ9H816 532 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 ALG13Q9NP73 1137 aaKnown RBP16.9■□□□□ 0.3
CKAP4-201ENST00000378026 ASB3Q9Y575 518 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 NUMBLQ9Y6R0 609 aa16.9■□□□□ 0.3
CKAP4-201ENST00000378026 CFAP69A5D8W1 941 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 E7ENQ6 273 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 HOXA13P31271 388 aaPredicted RBP16.89■□□□□ 0.29
CKAP4-201ENST00000378026 BFSP1Q12934 665 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 MOGSQ13724 837 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 SPARCL1Q14515 664 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 LBRQ14739 615 aaKnown RBP16.89■□□□□ 0.29
CKAP4-201ENST00000378026 PPM1KQ8N3J5 372 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 RPGRQ92834 1020 aaKnown RBP16.89■□□□□ 0.29
CKAP4-201ENST00000378026 KIFAP3Q92845 792 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 MIPEPQ99797 713 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 C12orf65Q9H3J6 166 aaKnown RBP16.89■□□□□ 0.29
CKAP4-201ENST00000378026 TRABDQ9H4I3 376 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 PHLPP1O60346 1717 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 GAS8O95995 478 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 UBTFL6P0CB48 400 aaPredicted RBP16.89■□□□□ 0.29
CKAP4-201ENST00000378026 KCNA3P22001 575 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 SLC1A5Q15758 541 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 PPP1R18Q6NYC8 613 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 NLRP9Q7RTR0 991 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 TRMT1LQ7Z2T5 733 aaKnown RBP16.89■□□□□ 0.29
CKAP4-201ENST00000378026 ENDOVQ8N8Q3 282 aaKnown RBP16.89■□□□□ 0.29
CKAP4-201ENST00000378026 NRG4Q8WWG1 115 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 FGD4Q96M96 766 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 STOML1Q9UBI4 398 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms