RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 GPBP1L1Q9HC44 474 aaPredicted RBP20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 KCNH4Q9UQ05 1017 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 FGFR4P22455 802 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 GNL1P36915 607 aaPredicted RBP20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 MAPRE2Q15555 327 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 ATL2Q8NHH9 583 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 STX18Q9P2W9 335 aaKnown RBP20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 ZC3H4Q9UPT8 1303 aaKnown RBP20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 MAP3K4Q9Y6R4 1608 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 LRRC8EQ6NSJ5 796 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 KCNV2Q8TDN2 545 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 ALDH8A1Q9H2A2 487 aaPredicted RBP20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 DGAT1O75907 488 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 CYBBP04839 570 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 TMEM143Q96AN5 459 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 TSC22D3Q99576 134 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 SLC7A5P2Q9GIP4 190 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 KDM4CQ9H3R0 1056 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 SNX9Q9Y5X1 595 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 USP27XA6NNY8 438 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 XKR3Q5GH77 459 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 RUBCNLQ9H714 662 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 HLA-DPA1P20036 260 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 TERF2Q15554 542 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 NUDT18Q6ZVK8 323 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 NSUN4Q96CB9 384 aaKnown RBP20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 TRPC7Q9HCX4 862 aa20.04■□□□□ 0.8
TBC1D4-201ENST00000377625 OCM2P0CE71 109 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 OCMP0CE72 109 aaPredicted RBP20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 GFAPP14136 432 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 ACOT2P49753 483 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 RBP5P82980 135 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 RAB42Q8N4Z0 105 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 HPS3Q969F9 1004 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 ARL8AQ96BM9 186 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 FBXO2Q9UK22 296 aaPredicted RBP20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 IQCA1LA6NCM1 817 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 MTHFD1LQ6UB35 978 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 RCOR2Q8IZ40 523 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 RAET1EQ8TD07 263 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 MAGEA9P43362 315 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 ANO5Q75V66 913 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 RBM46Q8TBY0 533 aaKnown RBP20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 STAT4Q14765 748 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 C3orf70A6NLC5 250 aaPredicted RBP20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 KCNQ2O43526 872 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 CUL3Q13618 768 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 SKIV2LQ15477 1246 aaKnown RBP20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 C16orf87Q6PH81 154 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 EFHBQ8N7U6 833 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 SH2D3AQ9BRG2 576 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 TRIM9Q9C026 710 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 ALG13Q9NP73 1137 aaKnown RBP20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 MTMR4Q9NYA4 1195 aa20.03■□□□□ 0.8
TBC1D4-201ENST00000377625 CHGBP05060 677 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 PDHA1P08559 390 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 PATL1Q86TB9 770 aaKnown RBP20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 AGAP3Q96P47 875 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 RGS7P49802 495 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 BAATQ14032 418 aaPredicted RBP20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 SYCP2LQ5T4T6 812 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 MFN1Q8IWA4 741 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 SLC30A5Q8TAD4 765 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 APEX2Q9UBZ4 518 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 MRFAP1Q9Y605 127 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 RARBP10826 455 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 ATICP31939 592 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 DAB2P98082 770 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 SPATA4Q8NEY3 305 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 CPA5Q8WXQ8 436 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 EPC1Q9H2F5 836 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 CDC42EP1Q00587 391 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 DDX53Q86TM3 631 aaKnown RBP20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 TEX13BQ9BXU2 312 aa20.02■□□□□ 0.8
TBC1D4-201ENST00000377625 PDGFRAP16234 1089 aa20.02■□□□□ 0.79
TBC1D4-201ENST00000377625 STILQ15468 1287 aa20.02■□□□□ 0.79
TBC1D4-201ENST00000377625 MICALL2Q8IY33 904 aa20.02■□□□□ 0.79
TBC1D4-201ENST00000377625 ICA1LQ8NDH6 482 aa20.02■□□□□ 0.79
TBC1D4-201ENST00000377625 YY1AP1Q9H869 796 aa20.02■□□□□ 0.79
TBC1D4-201ENST00000377625 POLRMTO00411 1230 aaKnown RBP20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 ASMTLO95671 621 aa20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 ZNF543Q08ER8 600 aa20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 LRRC23Q53EV4 343 aaPredicted RBP20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 GRAMD4Q6IC98 578 aa20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 ZNF467Q7Z7K2 595 aaPredicted RBP20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 GRAMD1AQ96CP6 724 aa20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 WWP1Q9H0M0 922 aa20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 DAGLAQ9Y4D2 1042 aa20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 CHRNA5P30532 468 aa20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 TMEM132DQ14C87 1099 aa20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 NBPF10Q6P3W6 841 aaKnown RBP20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 METTL16Q86W50 562 aaKnown RBP20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 TBC1D16Q8TBP0 767 aa20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 OTUB1Q96FW1 271 aaPredicted RBP20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 MAD2L2Q9UI95 211 aa20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 TADA2AO75478 443 aa20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 HSPA9P38646 679 aaKnown RBP20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 COBLL1Q53SF7 1204 aa20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 CLMNQ96JQ2 1002 aa20.01■□□□□ 0.79
TBC1D4-201ENST00000377625 STK33Q9BYT3 514 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms