RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 ARHGEF35A5YM69 484 aa21.14■□□□□ 0.98
CBWD3-204ENST00000377349 CASTOR2A6NHX0 329 aa21.14■□□□□ 0.98
CBWD3-204ENST00000377349 ANHXE9PGG2 379 aa21.14■□□□□ 0.98
CBWD3-204ENST00000377349 ZMYND10O75800 440 aa21.14■□□□□ 0.98
CBWD3-204ENST00000377349 LAMP2P13473 410 aa21.14■□□□□ 0.98
CBWD3-204ENST00000377349 CCT6AP40227 531 aaKnown RBP21.14■□□□□ 0.98
CBWD3-204ENST00000377349 DTWD2Q8NBA8 298 aa21.14■□□□□ 0.98
CBWD3-204ENST00000377349 NACC1Q96RE7 527 aa21.14■□□□□ 0.98
CBWD3-204ENST00000377349 SNTG2Q9NY99 539 aa21.14■□□□□ 0.98
CBWD3-204ENST00000377349 TADA2AO75478 443 aa21.13■□□□□ 0.97
CBWD3-204ENST00000377349 RECQL4O94761 1208 aa21.13■□□□□ 0.97
CBWD3-204ENST00000377349 SRFP11831 508 aa21.13■□□□□ 0.97
CBWD3-204ENST00000377349 IGFBP6P24592 240 aaPredicted RBP21.13■□□□□ 0.97
CBWD3-204ENST00000377349 CREMQ03060 361 aa21.13■□□□□ 0.97
CBWD3-204ENST00000377349 HTR4Q13639 388 aa21.13■□□□□ 0.97
CBWD3-204ENST00000377349 EEF1DP3Q658K8 133 aa21.13■□□□□ 0.97
CBWD3-204ENST00000377349 HAUS3Q68CZ6 603 aa21.13■□□□□ 0.97
CBWD3-204ENST00000377349 LNX1Q8TBB1 728 aaPredicted RBP21.13■□□□□ 0.97
CBWD3-204ENST00000377349 PIK3R5Q8WYR1 880 aa21.13■□□□□ 0.97
CBWD3-204ENST00000377349 NXPE3Q969Y0 559 aa21.13■□□□□ 0.97
CBWD3-204ENST00000377349 SNX27Q96L92 541 aa21.13■□□□□ 0.97
CBWD3-204ENST00000377349 CEP250Q9BV73 2442 aa21.13■□□□□ 0.97
CBWD3-204ENST00000377349 PATJQ8NI35 1801 aa21.13■□□□□ 0.97
CBWD3-204ENST00000377349 H3BQV1 296 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 N4BP3O15049 544 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 ADAM12O43184 909 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 RPA1P27694 616 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 TRAPPC10P48553 1259 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 ORC2Q13416 577 aaPredicted RBP21.12■□□□□ 0.97
CBWD3-204ENST00000377349 ANGPT1Q15389 498 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 PADI6Q6TGC4 694 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 GET4Q7L5D6 327 aaPredicted RBP21.12■□□□□ 0.97
CBWD3-204ENST00000377349 ZBTB8OSQ8IWT0 167 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 TMX3Q96JJ7 454 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 TTPALQ9BTX7 342 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 C2orf40Q9H1Z8 148 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 PIDD1Q9HB75 910 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.12■□□□□ 0.97
CBWD3-204ENST00000377349 LRWD1Q9UFC0 647 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 PCDHB6Q9Y5E3 794 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 GPR179Q6PRD1 2367 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 F5P12259 2224 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 ACKR2O00590 384 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 CD2BP2O95400 341 aaKnown RBP21.12■□□□□ 0.97
CBWD3-204ENST00000377349 PRKCBP05771 671 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 CYP11B2P19099 503 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 PRPF4BQ13523 1007 aaKnown RBP21.12■□□□□ 0.97
CBWD3-204ENST00000377349 ZRSR1Q15695 479 aaKnown RBP21.12■□□□□ 0.97
CBWD3-204ENST00000377349 ECM1Q16610 540 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 ST13P5Q8NFI4 369 aaPredicted RBP21.12■□□□□ 0.97
CBWD3-204ENST00000377349 GPR152Q8TDT2 470 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 NKD2Q969F2 451 aaPredicted RBP21.12■□□□□ 0.97
CBWD3-204ENST00000377349 CA14Q9ULX7 337 aa21.12■□□□□ 0.97
CBWD3-204ENST00000377349 THP07101 528 aa21.11■□□□□ 0.97
CBWD3-204ENST00000377349 GJB2P29033 226 aa21.11■□□□□ 0.97
CBWD3-204ENST00000377349 NAMPTP43490 491 aa21.11■□□□□ 0.97
CBWD3-204ENST00000377349 NTHL1P78549 312 aa21.11■□□□□ 0.97
CBWD3-204ENST00000377349 PTGDRQ13258 359 aa21.11■□□□□ 0.97
CBWD3-204ENST00000377349 PSMD5Q16401 504 aa21.11■□□□□ 0.97
CBWD3-204ENST00000377349 MAPK6Q16659 721 aa21.11■□□□□ 0.97
CBWD3-204ENST00000377349 FAM171A1Q5VUB5 890 aa21.11■□□□□ 0.97
CBWD3-204ENST00000377349 SNX29Q8TEQ0 813 aa21.11■□□□□ 0.97
CBWD3-204ENST00000377349 RPP25Q9BUL9 199 aaKnown RBP21.11■□□□□ 0.97
CBWD3-204ENST00000377349 KIFC3Q9BVG8 833 aa21.11■□□□□ 0.97
CBWD3-204ENST00000377349 TBC1D17Q9HA65 648 aa21.11■□□□□ 0.97
CBWD3-204ENST00000377349 POLD4Q9HCU8 107 aa21.11■□□□□ 0.97
CBWD3-204ENST00000377349 DLGAP2Q9P1A6 1054 aa21.11■□□□□ 0.97
CBWD3-204ENST00000377349 NUMBLQ9Y6R0 609 aa21.11■□□□□ 0.97
CBWD3-204ENST00000377349 U2AF2P26368 475 aaKnown RBP eCLIP21.1■□□□□ 0.97
CBWD3-204ENST00000377349 CD300LGQ6UXG3 332 aa21.1■□□□□ 0.97
CBWD3-204ENST00000377349 GRASPQ7Z6J2 395 aaPredicted RBP21.1■□□□□ 0.97
CBWD3-204ENST00000377349 RAB34Q9BZG1 259 aa21.1■□□□□ 0.97
CBWD3-204ENST00000377349 SLC2A4RGQ9NR83 387 aa21.1■□□□□ 0.97
CBWD3-204ENST00000377349 KIAA1024Q9UPX6 916 aa21.1■□□□□ 0.97
CBWD3-204ENST00000377349 TOB1P50616 345 aaPredicted RBP21.09■□□□□ 0.97
CBWD3-204ENST00000377349 FXR2P51116 673 aaKnown RBP eCLIP21.09■□□□□ 0.97
CBWD3-204ENST00000377349 NT5DC1Q5TFE4 455 aa21.09■□□□□ 0.97
CBWD3-204ENST00000377349 C4orf32Q8N8J7 132 aa21.09■□□□□ 0.97
CBWD3-204ENST00000377349 FGF14Q92915 247 aa21.09■□□□□ 0.97
CBWD3-204ENST00000377349 BHMT2Q9H2M3 363 aa21.09■□□□□ 0.97
CBWD3-204ENST00000377349 DDX19AQ9NUU7 478 aaKnown RBP21.09■□□□□ 0.97
CBWD3-204ENST00000377349 PP2D1A8MPX8 630 aa21.08■□□□□ 0.97
CBWD3-204ENST00000377349 FSHRP23945 695 aa21.08■□□□□ 0.97
CBWD3-204ENST00000377349 PHLDB3Q6NSJ2 640 aa21.08■□□□□ 0.97
CBWD3-204ENST00000377349 CEP57Q86XR8 500 aa21.08■□□□□ 0.97
CBWD3-204ENST00000377349 DEPTORQ8TB45 409 aa21.08■□□□□ 0.97
CBWD3-204ENST00000377349 PPP1R10Q96QC0 940 aaKnown RBP21.08■□□□□ 0.97
CBWD3-204ENST00000377349 ARHGEF3Q9NR81 526 aa21.08■□□□□ 0.97
CBWD3-204ENST00000377349 SMC3Q9UQE7 1217 aa21.08■□□□□ 0.97
CBWD3-204ENST00000377349 TMEM189-UBE2V1I3L0A0 370 aa21.07■□□□□ 0.96
CBWD3-204ENST00000377349 C8AP07357 584 aa21.07■□□□□ 0.96
CBWD3-204ENST00000377349 HNRNPA1P09651 372 aaKnown RBP eCLIP21.07■□□□□ 0.96
CBWD3-204ENST00000377349 FGFR3P22607 806 aa21.07■□□□□ 0.96
CBWD3-204ENST00000377349 HOXA9P31269 272 aa21.07■□□□□ 0.96
CBWD3-204ENST00000377349 PARM1Q6UWI2 310 aa21.07■□□□□ 0.96
CBWD3-204ENST00000377349 RSPO2Q6UXX9 243 aaPredicted RBP21.07■□□□□ 0.96
CBWD3-204ENST00000377349 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.07■□□□□ 0.96
CBWD3-204ENST00000377349 ADPGKQ9BRR6 497 aa21.07■□□□□ 0.96
CBWD3-204ENST00000377349 CDH7Q9ULB5 785 aa21.07■□□□□ 0.96
CBWD3-204ENST00000377349 GDAQ9Y2T3 454 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms