RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 NARSO43776 548 aaKnown RBP20.35■□□□□ 0.85
HDAC6-202ENST00000376610 PPM1LQ5SGD2 360 aa20.35■□□□□ 0.85
HDAC6-202ENST00000376610 ATF7IP2Q5U623 682 aa20.35■□□□□ 0.85
HDAC6-202ENST00000376610 FBXW11Q9UKB1 542 aa20.35■□□□□ 0.85
HDAC6-202ENST00000376610 KIAA1024Q9UPX6 916 aa20.35■□□□□ 0.85
HDAC6-202ENST00000376610 ZFP37Q9Y6Q3 630 aaPredicted RBP20.35■□□□□ 0.85
HDAC6-202ENST00000376610 FAM186AA6NE01 2351 aa20.35■□□□□ 0.85
HDAC6-202ENST00000376610 K7ERI5 159 aa20.34■□□□□ 0.85
HDAC6-202ENST00000376610 XYLBO75191 536 aa20.34■□□□□ 0.85
HDAC6-202ENST00000376610 HNRNPA1P09651 372 aaKnown RBP eCLIP20.34■□□□□ 0.85
HDAC6-202ENST00000376610 SRFP11831 508 aa20.34■□□□□ 0.85
HDAC6-202ENST00000376610 LAMP2P13473 410 aa20.34■□□□□ 0.85
HDAC6-202ENST00000376610 NPR3P17342 541 aa20.34■□□□□ 0.85
HDAC6-202ENST00000376610 FSHRP23945 695 aa20.34■□□□□ 0.85
HDAC6-202ENST00000376610 NBL1P41271 181 aa20.34■□□□□ 0.85
HDAC6-202ENST00000376610 PDIA5Q14554 519 aa20.34■□□□□ 0.85
HDAC6-202ENST00000376610 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.34■□□□□ 0.85
HDAC6-202ENST00000376610 SLC44A3Q8N4M1 653 aa20.34■□□□□ 0.85
HDAC6-202ENST00000376610 SNX29Q8TEQ0 813 aa20.34■□□□□ 0.85
HDAC6-202ENST00000376610 CLSTN3Q9BQT9 956 aa20.34■□□□□ 0.85
HDAC6-202ENST00000376610 KIFC3Q9BVG8 833 aa20.34■□□□□ 0.85
HDAC6-202ENST00000376610 PHLPP2Q6ZVD8 1323 aa20.33■□□□□ 0.85
HDAC6-202ENST00000376610 SEC24BO95487 1268 aa20.33■□□□□ 0.85
HDAC6-202ENST00000376610 C8AP07357 584 aa20.33■□□□□ 0.85
HDAC6-202ENST00000376610 YARSP54577 528 aaKnown RBP20.33■□□□□ 0.85
HDAC6-202ENST00000376610 EEF1DP3Q658K8 133 aa20.33■□□□□ 0.85
HDAC6-202ENST00000376610 CCDC105Q8IYK2 499 aa20.33■□□□□ 0.85
HDAC6-202ENST00000376610 LNX1Q8TBB1 728 aaPredicted RBP20.33■□□□□ 0.85
HDAC6-202ENST00000376610 UROC1Q96N76 676 aa20.33■□□□□ 0.85
HDAC6-202ENST00000376610 TOPORSQ9NS56 1045 aaPredicted RBP20.33■□□□□ 0.85
HDAC6-202ENST00000376610 DDX19AQ9NUU7 478 aaKnown RBP20.33■□□□□ 0.85
HDAC6-202ENST00000376610 CA14Q9ULX7 337 aa20.33■□□□□ 0.85
HDAC6-202ENST00000376610 POLIQ9UNA4 740 aa20.33■□□□□ 0.85
HDAC6-202ENST00000376610 USP20Q9Y2K6 914 aa20.33■□□□□ 0.85
HDAC6-202ENST00000376610 CCDC169A6NNP5 214 aa20.32■□□□□ 0.84
HDAC6-202ENST00000376610 TRAPPC3O43617 180 aa20.32■□□□□ 0.84
HDAC6-202ENST00000376610 B3GAT3O94766 335 aa20.32■□□□□ 0.84
HDAC6-202ENST00000376610 NAB2Q15742 525 aa20.32■□□□□ 0.84
HDAC6-202ENST00000376610 KRT79Q5XKE5 535 aa20.32■□□□□ 0.84
HDAC6-202ENST00000376610 DTWD2Q8NBA8 298 aa20.32■□□□□ 0.84
HDAC6-202ENST00000376610 NKD2Q969F2 451 aaPredicted RBP20.32■□□□□ 0.84
HDAC6-202ENST00000376610 CCDC94Q9BW85 323 aaPredicted RBP20.32■□□□□ 0.84
HDAC6-202ENST00000376610 DNM3Q9UQ16 869 aa20.32■□□□□ 0.84
HDAC6-202ENST00000376610 DMDP11532 3685 aa20.32■□□□□ 0.84
HDAC6-202ENST00000376610 TRIP11Q15643 1979 aa20.32■□□□□ 0.84
HDAC6-202ENST00000376610 TMEM189-UBE2V1I3L0A0 370 aa20.31■□□□□ 0.84
HDAC6-202ENST00000376610 LAD1O00515 517 aa20.31■□□□□ 0.84
HDAC6-202ENST00000376610 PI15O43692 258 aa20.31■□□□□ 0.84
HDAC6-202ENST00000376610 EDN1P05305 212 aa20.31■□□□□ 0.84
HDAC6-202ENST00000376610 HOXA9P31269 272 aa20.31■□□□□ 0.84
HDAC6-202ENST00000376610 DMP1Q13316 513 aaPredicted RBP20.31■□□□□ 0.84
HDAC6-202ENST00000376610 ECM1Q16610 540 aa20.31■□□□□ 0.84
HDAC6-202ENST00000376610 GLRA4Q5JXX5 417 aa20.31■□□□□ 0.84
HDAC6-202ENST00000376610 NT5DC1Q5TFE4 455 aa20.31■□□□□ 0.84
HDAC6-202ENST00000376610 DCLRE1AQ6PJP8 1040 aa20.31■□□□□ 0.84
HDAC6-202ENST00000376610 GRASPQ7Z6J2 395 aaPredicted RBP20.31■□□□□ 0.84
HDAC6-202ENST00000376610 FRMD5Q7Z6J6 570 aa20.31■□□□□ 0.84
HDAC6-202ENST00000376610 POLD4Q9HCU8 107 aa20.31■□□□□ 0.84
HDAC6-202ENST00000376610 TNFSF13BQ9Y275 285 aa20.31■□□□□ 0.84
HDAC6-202ENST00000376610 KIF3AQ9Y496 699 aa20.31■□□□□ 0.84
HDAC6-202ENST00000376610 VWA8A3KMH1 1905 aa20.31■□□□□ 0.84
HDAC6-202ENST00000376610 PRR23AA6NEV1 266 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 OR1D2P34982 312 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 PEX3P56589 373 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 PTGDRQ13258 359 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 HTR4Q13639 388 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 NBR1Q14596 966 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 ANGPT1Q15389 498 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 UVSSAQ2YD98 709 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 ZNF568Q3ZCX4 644 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 C4orf32Q8N8J7 132 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 IGSF22Q8N9C0 903 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 GPR152Q8TDT2 470 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 DRC1Q96MC2 740 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 PPP1R10Q96QC0 940 aaKnown RBP20.3■□□□□ 0.84
HDAC6-202ENST00000376610 MRPL4Q9BYD3 311 aaKnown RBP20.3■□□□□ 0.84
HDAC6-202ENST00000376610 CXCL16Q9H2A7 254 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 TBC1D17Q9HA65 648 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 CDH7Q9ULB5 785 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 NUMBLQ9Y6R0 609 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 DOCK6Q96HP0 2047 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 SPTBN4Q9H254 2564 aa20.3■□□□□ 0.84
HDAC6-202ENST00000376610 KRBA1A5PL33 1030 aa20.29■□□□□ 0.84
HDAC6-202ENST00000376610 ANHXE9PGG2 379 aa20.29■□□□□ 0.84
HDAC6-202ENST00000376610 CCL16O15467 120 aa20.29■□□□□ 0.84
HDAC6-202ENST00000376610 FGFR3P22607 806 aa20.29■□□□□ 0.84
HDAC6-202ENST00000376610 U2AF2P26368 475 aaKnown RBP eCLIP20.29■□□□□ 0.84
HDAC6-202ENST00000376610 CLCNKBP51801 687 aa20.29■□□□□ 0.84
HDAC6-202ENST00000376610 RAB33AQ14088 237 aa20.29■□□□□ 0.84
HDAC6-202ENST00000376610 AXDND1Q5T1B0 1012 aaPredicted RBP20.29■□□□□ 0.84
HDAC6-202ENST00000376610 ANKS3Q6ZW76 656 aa20.29■□□□□ 0.84
HDAC6-202ENST00000376610 MTSS1LQ765P7 747 aa20.29■□□□□ 0.84
HDAC6-202ENST00000376610 ASCL5Q7RTU5 278 aa20.29■□□□□ 0.84
HDAC6-202ENST00000376610 SLC7A14Q8TBB6 771 aa20.29■□□□□ 0.84
HDAC6-202ENST00000376610 TCHPQ9BT92 498 aa20.29■□□□□ 0.84
HDAC6-202ENST00000376610 ARHGEF3Q9NR81 526 aa20.29■□□□□ 0.84
HDAC6-202ENST00000376610 SLC38A7Q9NVC3 462 aa20.29■□□□□ 0.84
HDAC6-202ENST00000376610 MTRRQ9UBK8 725 aa20.29■□□□□ 0.84
HDAC6-202ENST00000376610 RBM19Q9Y4C8 960 aaKnown RBP20.29■□□□□ 0.84
HDAC6-202ENST00000376610 GRM5P41594 1212 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms