RNA–Protein interactions for RNA: ENST00000376324.7

CHRDL2-202, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-202ENST00000376324 RNF19AQ9NV58 838 aa16.02■□□□□ 0.16
CHRDL2-202ENST00000376324 KLK14Q9P0G3 267 aa16.02■□□□□ 0.16
CHRDL2-202ENST00000376324 PCDHB2Q9Y5E7 798 aa16.02■□□□□ 0.16
CHRDL2-202ENST00000376324 TANC1Q9C0D5 1861 aa16.02■□□□□ 0.16
CHRDL2-202ENST00000376324 PTPRJQ12913 1337 aa16.02■□□□□ 0.15
CHRDL2-202ENST00000376324 MKI67P46013 3256 aaKnown RBP16.02■□□□□ 0.15
CHRDL2-202ENST00000376324 MEFVO15553 781 aaPredicted RBP16.02■□□□□ 0.15
CHRDL2-202ENST00000376324 RECQL4O94761 1208 aa16.02■□□□□ 0.15
CHRDL2-202ENST00000376324 CDC25BP30305 580 aa16.02■□□□□ 0.15
CHRDL2-202ENST00000376324 YARSP54577 528 aaKnown RBP16.02■□□□□ 0.15
CHRDL2-202ENST00000376324 DSC3Q14574 896 aa16.02■□□□□ 0.15
CHRDL2-202ENST00000376324 SLC10A6Q3KNW5 377 aa16.02■□□□□ 0.15
CHRDL2-202ENST00000376324 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.02■□□□□ 0.15
CHRDL2-202ENST00000376324 DBF4BQ8NFT6 615 aa16.02■□□□□ 0.15
CHRDL2-202ENST00000376324 CGRRF1Q99675 332 aa16.02■□□□□ 0.15
CHRDL2-202ENST00000376324 TMEM117Q9H0C3 514 aa16.02■□□□□ 0.15
CHRDL2-202ENST00000376324 TRIM43BA6NCK2 446 aa16.01■□□□□ 0.15
CHRDL2-202ENST00000376324 STX10O60499 249 aa16.01■□□□□ 0.15
CHRDL2-202ENST00000376324 PBX1P40424 430 aa16.01■□□□□ 0.15
CHRDL2-202ENST00000376324 MXI1P50539 228 aa16.01■□□□□ 0.15
CHRDL2-202ENST00000376324 TFAMQ00059 246 aaKnown RBP16.01■□□□□ 0.15
CHRDL2-202ENST00000376324 OR5B17Q8NGF7 314 aa16.01■□□□□ 0.15
CHRDL2-202ENST00000376324 SEPT8Q92599 483 aa16.01■□□□□ 0.15
CHRDL2-202ENST00000376324 ZNF516Q92618 1163 aa16.01■□□□□ 0.15
CHRDL2-202ENST00000376324 LPPQ93052 612 aa16.01■□□□□ 0.15
CHRDL2-202ENST00000376324 TRIM43Q96BQ3 446 aaPredicted RBP16.01■□□□□ 0.15
CHRDL2-202ENST00000376324 LSM14BQ9BX40 385 aaKnown RBP16.01■□□□□ 0.15
CHRDL2-202ENST00000376324 CXCL16Q9H2A7 254 aa16.01■□□□□ 0.15
CHRDL2-202ENST00000376324 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHRDL2-202ENST00000376324 IL18RAPO95256 599 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 NFICP08651 508 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 ITGA4P13612 1032 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 RAG1P15918 1043 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 DEKP35659 375 aaKnown RBP16■□□□□ 0.15
CHRDL2-202ENST00000376324 CCDC173Q0VFZ6 552 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 KCNMA1Q12791 1236 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 BIRC3Q13489 604 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 SURF1Q15526 300 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 PLEKHG4Q58EX7 1191 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 SPECC1LQ69YQ0 1117 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 JADE1Q6IE81 842 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 GBP6Q6ZN66 633 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 SV2AQ7L0J3 742 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 RTN4RL1Q86UN2 441 aaPredicted RBP16■□□□□ 0.15
CHRDL2-202ENST00000376324 EFCAB13Q8IY85 973 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 ABHD8Q96I13 439 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 ERGIC2Q96RQ1 377 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 TMEM8AQ9HCN3 771 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 ALPK3Q96L96 1907 aa16■□□□□ 0.15
CHRDL2-202ENST00000376324 A0A1W2PQC6 194 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 TTC26A0AVF1 554 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 MEIS3P2A8K0S8 358 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 N4BP1O75113 896 aaKnown RBP15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 TMEM191BP0C7N4 346 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 SLC9A1P19634 815 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 ITGB8P26012 769 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 APBA1Q02410 837 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 EXOC3L4Q17RC7 722 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 TCTN1Q2MV58 587 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 GLRA4Q5JXX5 417 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 KRT39Q6A163 491 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 HACE1Q8IYU2 909 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 TMEM130Q8N3G9 435 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 CPLX3Q8WVH0 158 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 LINC01599Q8WXQ3 324 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 PDLIM2Q96JY6 352 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 SNX27Q96L92 541 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 MTMR12Q9C0I1 747 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 FAM207AQ9NSI2 230 aaPredicted RBP15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 GCNT4Q9P109 453 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 SIK3Q9Y2K2 1263 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 CCDC85CA6NKD9 419 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 KIAA0355O15063 1070 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 PHACTR2O75167 634 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 LRRN2O75325 713 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 CLSTN1O94985 981 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 TIMP1P01033 207 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 PTMAP06454 111 aaKnown RBP15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 ACTN1P12814 892 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 GTF2H1P32780 548 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 RAB27AP51159 221 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 ENPEPQ07075 957 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 GOLGA8FQ08AF8 430 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 GOLGA8DPQ0D2H9 430 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 CETN1Q12798 172 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 TDRD10Q5VZ19 366 aaKnown RBP15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 WDR49Q8IV35 697 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 KIF12Q96FN5 646 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 RGS18Q9NS28 235 aa15.99■□□□□ 0.15
CHRDL2-202ENST00000376324 PARNO95453 639 aaKnown RBP15.98■□□□□ 0.15
CHRDL2-202ENST00000376324 TNNC2P02585 160 aa15.98■□□□□ 0.15
CHRDL2-202ENST00000376324 C4BPAP04003 597 aaKnown RBP15.98■□□□□ 0.15
CHRDL2-202ENST00000376324 GUCY2FP51841 1108 aa15.98■□□□□ 0.15
CHRDL2-202ENST00000376324 MCCD1P59942 119 aaPredicted RBP15.98■□□□□ 0.15
CHRDL2-202ENST00000376324 CLDN10P78369 228 aa15.98■□□□□ 0.15
CHRDL2-202ENST00000376324 LRMPQ12912 555 aa15.98■□□□□ 0.15
CHRDL2-202ENST00000376324 TMEM132DQ14C87 1099 aa15.98■□□□□ 0.15
CHRDL2-202ENST00000376324 DUOXA2Q1HG44 320 aa15.98■□□□□ 0.15
CHRDL2-202ENST00000376324 ECHDC2Q86YB7 292 aa15.98■□□□□ 0.15
CHRDL2-202ENST00000376324 C7orf61Q8IZ16 206 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms