RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 CSRNP2Q9H175 543 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 WRAP73Q9P2S5 460 aaPredicted RBP13.43□□□□□ -0.26
LSM2-208ENST00000375661 DOCK6Q96HP0 2047 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 VWA3AA6NCI4 1184 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 PP2D1A8MPX8 630 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 TSPAN1O60635 241 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 ZMYND10O75800 440 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 YEATS4O95619 227 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 SPATA31C1P0DKV0 1188 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 MARCKSP29966 332 aaPredicted RBP13.42□□□□□ -0.26
LSM2-208ENST00000375661 SCNN1GP51170 649 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 STARD6P59095 220 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 CYP4A11Q02928 519 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 TFDP1Q14186 410 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 CTTNQ14247 550 aaKnown RBP13.42□□□□□ -0.26
LSM2-208ENST00000375661 STK38Q15208 465 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 XKR9Q5GH70 373 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 GET4Q7L5D6 327 aaPredicted RBP13.42□□□□□ -0.26
LSM2-208ENST00000375661 PALB2Q86YC2 1186 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 PJA1Q8NG27 643 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 RIN2Q8WYP3 895 aaPredicted RBP13.42□□□□□ -0.26
LSM2-208ENST00000375661 LXNQ9BS40 222 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 NFKBIZQ9BYH8 718 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 ZSWIM4Q9H7M6 989 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 MIOSQ9NXC5 875 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 LRWD1Q9UFC0 647 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 FBXO2Q9UK22 296 aaPredicted RBP13.42□□□□□ -0.26
LSM2-208ENST00000375661 ADAM28Q9UKQ2 775 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 SRPRBQ9Y5M8 271 aaKnown RBP13.42□□□□□ -0.26
LSM2-208ENST00000375661 R4GN57 208 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 ZNF292O60281 2723 aa13.42□□□□□ -0.26
LSM2-208ENST00000375661 CACNA1IQ9P0X4 2223 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 MED24O75448 989 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 DCNP07585 359 aaKnown RBP13.41□□□□□ -0.26
LSM2-208ENST00000375661 HNRNPA1P09651 372 aaKnown RBP eCLIP13.41□□□□□ -0.26
LSM2-208ENST00000375661 SPATA31D3P0C874 917 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 CDC25AP30304 524 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 GRIK3Q13003 919 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 ECM1Q16610 540 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 ZNF528Q3MIS6 628 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 SPECC1Q5M775 1068 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 SPATA31D4Q6ZUB0 917 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 CATSPER3Q86XQ3 398 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 KIAA2013Q8IYS2 634 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 CLIC6Q96NY7 704 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 MMTAG2Q9BU76 263 aaKnown RBP13.41□□□□□ -0.26
LSM2-208ENST00000375661 GPR62Q9BZJ7 368 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 TRIM6Q9C030 488 aaPredicted RBP13.41□□□□□ -0.26
LSM2-208ENST00000375661 RNF39Q9H2S5 420 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 CHMP5Q9NZZ3 219 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 RCOR1Q9UKL0 485 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 NUMBLQ9Y6R0 609 aa13.41□□□□□ -0.26
LSM2-208ENST00000375661 SF3B1O75533 1304 aaKnown RBP eCLIP13.4□□□□□ -0.26
LSM2-208ENST00000375661 INO80B-WBP1J3KQ70 363 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 SPTLC2O15270 562 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 PPP6R2O75170 966 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 ARF4P18085 180 aaPredicted RBP13.4□□□□□ -0.26
LSM2-208ENST00000375661 FSHRP23945 695 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 HOXA9P31269 272 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 MAGEA9P43362 315 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 PRKCQQ04759 706 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 AMHR2Q16671 573 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 RSPO2Q6UXX9 243 aaPredicted RBP13.4□□□□□ -0.26
LSM2-208ENST00000375661 MTSS1LQ765P7 747 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 TPH2Q8IWU9 490 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 GSTCDQ8NEC7 633 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 ERMNQ8TAM6 284 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 CPB2Q96IY4 423 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 ZFP42Q96MM3 310 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 HINFPQ9BQA5 517 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 POLR3CQ9BUI4 534 aaPredicted RBP13.4□□□□□ -0.26
LSM2-208ENST00000375661 OSBPL6Q9BZF3 934 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 RAB34Q9BZG1 259 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 DLL3Q9NYJ7 618 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 FBXW11Q9UKB1 542 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 CFAP45Q9UL16 551 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 CDH7Q9ULB5 785 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 HES2Q9Y543 173 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 ATP6V1DQ9Y5K8 247 aa13.4□□□□□ -0.26
LSM2-208ENST00000375661 VWA8A3KMH1 1905 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 EP300Q09472 2414 aaPredicted RBP13.39□□□□□ -0.27
LSM2-208ENST00000375661 A0A087WWV3 80 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 MED19A0JLT2 244 aaPredicted RBP13.39□□□□□ -0.27
LSM2-208ENST00000375661 ZBTB39O15060 712 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 SPTLC1O15269 473 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 KINO60870 393 aaKnown RBP13.39□□□□□ -0.27
LSM2-208ENST00000375661 TADA2AO75478 443 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 DGAT1O75907 488 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 LYPLA2O95372 231 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 POU2F2P09086 479 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 RPA1P27694 616 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 LONP1P36776 959 aaKnown RBP13.39□□□□□ -0.27
LSM2-208ENST00000375661 KRT85P78386 507 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 MBTD1Q05BQ5 628 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 LIN9Q5TKA1 542 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 PDXDC1Q6P996 788 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 SLC27A1Q6PCB7 646 aa13.39□□□□□ -0.27
LSM2-208ENST00000375661 GPR161Q8N6U8 529 aaKnown RBP13.39□□□□□ -0.27
LSM2-208ENST00000375661 KRI1Q8N9T8 703 aaKnown RBP13.39□□□□□ -0.27
LSM2-208ENST00000375661 SUMF1Q8NBK3 374 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms