RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SSTR3P32745 418 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 SNRNP35Q16560 246 aaKnown RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 FAM102AQ5T9C2 384 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 SNRNP48Q6IEG0 339 aaKnown RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 CYFIP1Q7L576 1253 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 DPP9Q86TI2 863 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 CPA5Q8WXQ8 436 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 FOXP3Q9BZS1 431 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 SEMA6BQ9H3T3 888 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 KLHL11Q9NVR0 708 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 NYAP2Q9P242 653 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 C1orf167Q5SNV9 1468 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 DIP2BQ9P265 1576 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 APOEP02649 317 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 HSPA8P11142 646 aaKnown RBP12.21□□□□□ -0.45
PTCH1-203ENST00000375274 CCNA1P78396 465 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 TAP1Q03518 808 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 PKN1Q16512 942 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 DUOXA2Q1HG44 320 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 HEATR6Q6AI08 1181 aaKnown RBP12.21□□□□□ -0.45
PTCH1-203ENST00000375274 CYB5D1Q6P9G0 228 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 TRIM67Q6ZTA4 783 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 SLC26A7Q8TE54 656 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 PRDM4Q9UKN5 801 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 FRMPD1Q5SYB0 1578 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 M0QYV0 167 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 GNGT2O14610 69 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 EIF3DO15371 548 aaKnown RBP eCLIP12.21□□□□□ -0.45
PTCH1-203ENST00000375274 ECE2O60344 883 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 TFRCP02786 760 aaKnown RBP12.21□□□□□ -0.45
PTCH1-203ENST00000375274 ARL13BQ3SXY8 428 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 ACAD11Q709F0 780 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 SMIM5Q71RC9 77 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 CATSPER3Q86XQ3 398 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 NPHS2Q9NP85 383 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 KCND1Q9NSA2 647 aa12.21□□□□□ -0.45
PTCH1-203ENST00000375274 PIK3C2BO00750 1634 aa12.21□□□□□ -0.46
PTCH1-203ENST00000375274 ATMINO43313 823 aaPredicted RBP12.21□□□□□ -0.46
PTCH1-203ENST00000375274 ERFP50548 548 aa12.21□□□□□ -0.46
PTCH1-203ENST00000375274 KLC3Q6P597 504 aa12.21□□□□□ -0.46
PTCH1-203ENST00000375274 RCOR2Q8IZ40 523 aa12.21□□□□□ -0.46
PTCH1-203ENST00000375274 TBC1D16Q8TBP0 767 aa12.21□□□□□ -0.46
PTCH1-203ENST00000375274 DTX3LQ8TDB6 740 aa12.21□□□□□ -0.46
PTCH1-203ENST00000375274 ALKBH8Q96BT7 664 aaKnown RBP12.21□□□□□ -0.46
PTCH1-203ENST00000375274 PACSIN1Q9BY11 444 aa12.21□□□□□ -0.46
PTCH1-203ENST00000375274 QTRT2Q9H974 415 aaKnown RBP12.21□□□□□ -0.46
PTCH1-203ENST00000375274 GLI1P08151 1106 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 TYK2P29597 1187 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 CNGA1P29973 690 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 GPC3P51654 580 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 EIF3EP60228 445 aaKnown RBP12.2□□□□□ -0.46
PTCH1-203ENST00000375274 IL1RL1Q01638 556 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 KLC1Q07866 573 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 CIAPIN1Q6FI81 312 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 ANO5Q75V66 913 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 C3orf20Q8ND61 904 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 DCPSQ96C86 337 aaKnown RBP12.2□□□□□ -0.46
PTCH1-203ENST00000375274 ZNF446Q9NWS9 450 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 PCDHB2Q9Y5E7 798 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 MAP2P11137 1827 aaKnown RBP12.2□□□□□ -0.46
PTCH1-203ENST00000375274 GOLGA8CPA6NN73 597 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 ADGRB2O60241 1585 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 MGEA5O60502 916 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 PMS1P54277 932 aaKnown RBP12.2□□□□□ -0.46
PTCH1-203ENST00000375274 LRRC34Q8IZ02 419 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 RAPGEF5Q92565 580 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 LBHD1Q9BQE6 289 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-203ENST00000375274 TIPINQ9BVW5 301 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 TSSK1BQ9BXA7 367 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 THAP2Q9H0W7 228 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 MRPL46Q9H2W6 279 aaKnown RBP12.2□□□□□ -0.46
PTCH1-203ENST00000375274 YY1AP1Q9H869 796 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 ZNF302Q9NR11 478 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 BFARQ9NZS9 450 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 PSMC3IPQ9P2W1 217 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-203ENST00000375274 CHORDC1Q9UHD1 332 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-203ENST00000375274 ZHX2Q9Y6X8 837 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 C21orf2O43822 256 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 COILP38432 576 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-203ENST00000375274 MAGEA4P43358 317 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 ITGA8P53708 1063 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 KDSRQ06136 332 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 SPP2Q13103 211 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 TMED1Q13445 227 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 SLC12A1Q13621 1099 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 SLC13A5Q86YT5 568 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-203ENST00000375274 SP8Q8IXZ3 490 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 RYBPQ8N488 228 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-203ENST00000375274 CXorf38Q8TB03 319 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 MTMR8Q96EF0 704 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 RANBP17Q9H2T7 1088 aaKnown RBP12.2□□□□□ -0.46
PTCH1-203ENST00000375274 XAB2Q9HCS7 855 aaKnown RBP12.2□□□□□ -0.46
PTCH1-203ENST00000375274 TRIM33Q9UPN9 1127 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 PON1P27169 355 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 KIF22Q14807 665 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 CEP70Q8NHQ1 597 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 DHX38Q92620 1227 aaKnown RBP12.2□□□□□ -0.46
PTCH1-203ENST00000375274 STAMBPL1Q96FJ0 436 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 SENP7Q9BQF6 1050 aa12.2□□□□□ -0.46
PTCH1-203ENST00000375274 MRPL4Q9BYD3 311 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms