RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 DENND2CQ68D51 928 aa18.27■□□□□ 0.52
RXRB-201ENST00000374680 TMEM270Q6UE05 265 aa18.27■□□□□ 0.52
RXRB-201ENST00000374680 GPD1LQ8N335 351 aa18.27■□□□□ 0.52
RXRB-201ENST00000374680 ZBED3Q96IU2 234 aaPredicted RBP18.27■□□□□ 0.52
RXRB-201ENST00000374680 IFT74Q96LB3 600 aa18.27■□□□□ 0.52
RXRB-201ENST00000374680 CCDC114Q96M63 670 aa18.27■□□□□ 0.52
RXRB-201ENST00000374680 IWS1Q96ST2 819 aa18.27■□□□□ 0.52
RXRB-201ENST00000374680 A1CFQ9NQ94 594 aaKnown RBP18.27■□□□□ 0.52
RXRB-201ENST00000374680 SLC9A2Q9UBY0 812 aa18.27■□□□□ 0.52
RXRB-201ENST00000374680 ASIC3Q9UHC3 531 aa18.27■□□□□ 0.52
RXRB-201ENST00000374680 PTPRJQ12913 1337 aa18.27■□□□□ 0.51
RXRB-201ENST00000374680 MTMR3Q13615 1198 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 MYBPC2Q14324 1141 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 NIPA1Q7RTP0 329 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 ZBTB33Q86T24 672 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 TADA2BQ86TJ2 420 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 ZNF280CQ8ND82 737 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 RAPGEF5Q92565 580 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 TCHPQ9BT92 498 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 DDX23Q9BUQ8 820 aaKnown RBP18.26■□□□□ 0.51
RXRB-201ENST00000374680 CYP26B1Q9NR63 512 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 GRHL1Q9NZI5 618 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 RASAL2Q9UJF2 1139 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 KCNA2P16389 499 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 MARK3P27448 753 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 SFNP31947 248 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 SGO2Q562F6 1265 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 DALRD3Q5D0E6 543 aaKnown RBP18.26■□□□□ 0.51
RXRB-201ENST00000374680 NSUN6Q8TEA1 469 aaKnown RBP18.26■□□□□ 0.51
RXRB-201ENST00000374680 ACSF2Q96CM8 615 aaPredicted RBP18.26■□□□□ 0.51
RXRB-201ENST00000374680 C1orf112Q9NSG2 853 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 ANKEF1Q9NU02 776 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 UMODL1Q5DID0 1318 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 SYNGAP1Q96PV0 1343 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 COILP38432 576 aaPredicted RBP18.26■□□□□ 0.51
RXRB-201ENST00000374680 PIK3CAP42336 1068 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 RWDD2BP57060 319 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 HP1BP3Q5SSJ5 553 aaPredicted RBP18.26■□□□□ 0.51
RXRB-201ENST00000374680 LRIG3Q6UXM1 1119 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 TAX1BP1Q86VP1 789 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 TMEM130Q8N3G9 435 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 CNKSR2Q8WXI2 1034 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 ATP6V0A1Q93050 837 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 EPB41L4BQ9H329 900 aa18.26■□□□□ 0.51
RXRB-201ENST00000374680 TTLL13PA6NNM8 815 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 MIF4GDA9UHW6 222 aaKnown RBP18.25■□□□□ 0.51
RXRB-201ENST00000374680 PI4K2BG5E9Z4 385 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 NFKBIEO00221 500 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 P4HA2O15460 535 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 LYPLA2O95372 231 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 HLA-DRAP01903 254 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 PTPRAP18433 802 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 CD58P19256 250 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 OSTNP61366 133 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 ATP13A4Q4VNC1 1196 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 KAZNQ674X7 775 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 DHX37Q8IY37 1157 aaKnown RBP18.25■□□□□ 0.51
RXRB-201ENST00000374680 KIFAP3Q92845 792 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 ZBTB10Q96DT7 871 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 TTC7AQ9ULT0 858 aaPredicted RBP18.25■□□□□ 0.51
RXRB-201ENST00000374680 PCDHB4Q9Y5E5 795 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 PSAPP07602 524 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 IBSPP21815 317 aaPredicted RBP18.25■□□□□ 0.51
RXRB-201ENST00000374680 RFX1P22670 979 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 DRP2Q13474 957 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 LRRC14Q15048 493 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 ACAD10Q6JQN1 1059 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 CPLX4Q7Z7G2 160 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 C12orf56Q8IXR9 622 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 MTMR14Q8NCE2 650 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 DDX1Q92499 740 aaKnown RBP18.25■□□□□ 0.51
RXRB-201ENST00000374680 KAT2BQ92831 832 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 ADAM33Q9BZ11 813 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 MTUS1Q9ULD2 1270 aa18.25■□□□□ 0.51
RXRB-201ENST00000374680 GMNCA6NCL1 334 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 GRIN3BO60391 1043 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 MAP3K10Q02779 954 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 LONRF1Q17RB8 773 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 C11orf63Q6NUN7 778 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 ANKRD35Q8N283 1001 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 ARFGAP2Q8N6H7 521 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 HAPLN2Q9GZV7 340 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 FBXO40Q9UH90 709 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 ZNF214Q9UL59 606 aaPredicted RBP18.24■□□□□ 0.51
RXRB-201ENST00000374680 R3HDM2Q9Y2K5 976 aaKnown RBP18.24■□□□□ 0.51
RXRB-201ENST00000374680 COL2A1P02458 1487 aaPredicted RBP18.24■□□□□ 0.51
RXRB-201ENST00000374680 HGSO14964 777 aaPredicted RBP18.24■□□□□ 0.51
RXRB-201ENST00000374680 PPFIA2O75334 1257 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 GZMAP12544 262 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 CHRNA3P32297 505 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 GPC3P51654 580 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 WDR44Q5JSH3 913 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 TDRD10Q5VZ19 366 aaKnown RBP18.24■□□□□ 0.51
RXRB-201ENST00000374680 AEBP2Q6ZN18 517 aaPredicted RBP18.24■□□□□ 0.51
RXRB-201ENST00000374680 FMNL3Q8IVF7 1028 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 TAB3Q8N5C8 712 aaPredicted RBP18.24■□□□□ 0.51
RXRB-201ENST00000374680 ASAP3Q8TDY4 903 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 PPM1EQ8WY54 764 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 WNT8AQ9H1J5 351 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 R3HDMLQ9H3Y0 253 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms