RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 POLGP54098 1239 aaPredicted RBP13.02□□□□□ -0.33
HMGCL-202ENST00000374487 MTERF2Q49AM1 385 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 BRDTQ58F21 947 aaPredicted RBP13.02□□□□□ -0.33
HMGCL-202ENST00000374487 CYFIP1Q7L576 1253 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 PALB2Q86YC2 1186 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 RHOT2Q8IXI1 618 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 TRPV1Q8NER1 839 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 CHST13Q8NET6 341 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 PXYLP1Q8TE99 480 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 SOCS4Q8WXH5 440 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 HES6Q96HZ4 224 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 CALR3Q96L12 384 aaKnown RBP13.02□□□□□ -0.33
HMGCL-202ENST00000374487 APBA2Q99767 749 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 MAF1Q9H063 256 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 RNF208Q9H0X6 261 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 POLR3FQ9H1D9 316 aaPredicted RBP13.02□□□□□ -0.33
HMGCL-202ENST00000374487 FAM204AQ9H8W3 233 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 TMEM8AQ9HCN3 771 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 KCNG1Q9UIX4 513 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 TMEM59LQ9UK28 342 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 RAD51CO43502 376 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 SUPT20HL2P0C7V6 817 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
HMGCL-202ENST00000374487 ABCD1P33897 745 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 RTP1P59025 263 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 KCTD2Q14681 263 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 FBXL13Q8NEE6 735 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 DNERQ8NFT8 737 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 TMC2Q8TDI7 906 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 SCFD2Q8WU76 684 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 RIN2Q8WYP3 895 aaPredicted RBP13.01□□□□□ -0.33
HMGCL-202ENST00000374487 KAT5Q92993 513 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 CAVIN3Q969G5 261 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 ARHGEF26Q96DR7 871 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 FGD4Q96M96 766 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 RUFY1Q96T51 708 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 PSD3Q9NYI0 1048 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 CTTNBP2NLQ9P2B4 639 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 PFASO15067 1338 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 CCDC66A2RUB6 948 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 ZSCAN5CA6NGD5 496 aaPredicted RBP13.01□□□□□ -0.33
HMGCL-202ENST00000374487 CYP26A1O43174 497 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 HSF2BPO75031 334 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 SGPL1O95470 568 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 SP2Q02086 613 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 TAF3Q5VWG9 929 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 SLC39A4Q6P5W5 647 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 SEPT14Q6ZU15 432 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 FAM71AQ8IYT1 594 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 GPD1LQ8N335 351 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 SEMA4DQ92854 862 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 MAML3Q96JK9 1138 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 MFSD14AQ96MC6 490 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 NT5C1BQ96P26 610 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 FAM213AQ9BRX8 229 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 XPNPEP1Q9NQW7 623 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 ZNF302Q9NR11 478 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 PDLIM7Q9NR12 457 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 RAB20Q9NX57 234 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 USP20Q9Y2K6 914 aa13.01□□□□□ -0.33
HMGCL-202ENST00000374487 ADGRA3Q8IWK6 1321 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 CCDC188H7C350 402 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 STRNO43815 780 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 RTN2O75298 545 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 HMGCRP04035 888 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 GARTP22102 1010 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 GTF2H1P32780 548 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 LIG4P49917 911 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 GPC5P78333 572 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 CYP24A1Q07973 514 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 STRN3Q13033 797 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 NNTQ13423 1086 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 PRPF4BQ13523 1007 aaKnown RBP13□□□□□ -0.33
HMGCL-202ENST00000374487 ZNF792Q3KQV3 632 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 ALS2CLQ60I27 953 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 FBXL18Q96ME1 805 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 DEFB118Q96PH6 123 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 ISCUQ9H1K1 167 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 DIS3Q9Y2L1 958 aaKnown RBP13□□□□□ -0.33
HMGCL-202ENST00000374487 ZNF233A6NK53 670 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 AGPSO00116 658 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 SART1O43290 800 aaKnown RBP13□□□□□ -0.33
HMGCL-202ENST00000374487 HOXC6P09630 235 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 CAPN2P17655 700 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 GPC3P51654 580 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 EMC2Q15006 297 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 SV2AQ7L0J3 742 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 SLC47A2Q86VL8 602 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 RASGEF1CQ8N431 466 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 TAS1R2Q8TE23 839 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 EPS8L1Q8TE68 723 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 AFAP1L1Q8TED9 768 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 CASKIN2Q8WXE0 1202 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 KREMEN1Q96MU8 473 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 TOPORSQ9NS56 1045 aaPredicted RBP13□□□□□ -0.33
HMGCL-202ENST00000374487 FBXO40Q9UH90 709 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 COQ4Q9Y3A0 265 aa13□□□□□ -0.33
HMGCL-202ENST00000374487 DNAJC25-GNG10A0A024R161 153 aa12.99□□□□□ -0.33
HMGCL-202ENST00000374487 SOWAHBA6NEL2 793 aa12.99□□□□□ -0.33
HMGCL-202ENST00000374487 OPA1O60313 960 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms