RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.3□□□□□ -0.6
TRERF1-203ENST00000372917 TRIM49BA6NDI0 452 aa11.3□□□□□ -0.6
TRERF1-203ENST00000372917 TMEM114B3SHH9 223 aa11.3□□□□□ -0.6
TRERF1-203ENST00000372917 PFDN6O15212 129 aa11.3□□□□□ -0.6
TRERF1-203ENST00000372917 FUCA1P04066 466 aa11.3□□□□□ -0.6
TRERF1-203ENST00000372917 RXRBP28702 533 aa11.3□□□□□ -0.6
TRERF1-203ENST00000372917 IFNA8P32881 189 aa11.3□□□□□ -0.6
TRERF1-203ENST00000372917 POLR2FP61218 127 aaKnown RBP11.3□□□□□ -0.6
TRERF1-203ENST00000372917 COBLL1Q53SF7 1204 aa11.3□□□□□ -0.6
TRERF1-203ENST00000372917 TWF2Q6IBS0 349 aaKnown RBP11.3□□□□□ -0.6
TRERF1-203ENST00000372917 RNF19BQ6ZMZ0 732 aa11.3□□□□□ -0.6
TRERF1-203ENST00000372917 ADSSL1Q8N142 457 aa11.3□□□□□ -0.6
TRERF1-203ENST00000372917 FAM161BQ96MY7 647 aa11.3□□□□□ -0.6
TRERF1-203ENST00000372917 NKIRAS1Q9NYS0 192 aa11.3□□□□□ -0.6
TRERF1-203ENST00000372917 TMOD2Q9NZR1 351 aa11.3□□□□□ -0.6
TRERF1-203ENST00000372917 RPL26L1Q9UNX3 145 aaKnown RBP11.3□□□□□ -0.6
TRERF1-203ENST00000372917 CRYBG1Q9Y4K1 1723 aa11.3□□□□□ -0.6
TRERF1-203ENST00000372917 TMEM2Q9UHN6 1383 aa11.3□□□□□ -0.6
TRERF1-203ENST00000372917 PCP4L1A6NKN8 68 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 FOXO6A8MYZ6 492 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 K7EPI3 171 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 RANBP6O60518 1105 aaKnown RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 GAS8O95995 478 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 GLULP15104 373 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 KRT4P19013 534 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 HMOX2P30519 316 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 ASPHQ12797 758 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 PDK3Q15120 406 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 RPS6KA1Q15418 735 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 KCNJ8Q15842 424 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 EPHA10Q5JZY3 1008 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 SIGIRRQ6IA17 410 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 CCDC25Q86WR0 208 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 SLC38A6Q8IZM9 456 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 ESR2Q92731 530 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 TRIM47Q96LD4 638 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 MKNK1Q9BUB5 465 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 RNF38Q9H0F5 515 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 DMTF1Q9Y222 760 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 TBC1D30Q9Y2I9 924 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 A8MU76 341 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 SH3BP5O60239 455 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 T-ENOLP0DO92 83 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 ANPEPP15144 967 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 SLC5A2P31639 672 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 MTIF2P46199 727 aaKnown RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 CHN2P52757 468 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 BASP1P80723 227 aaKnown RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 PTPN12Q05209 780 aaKnown RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 SUZ12Q15022 739 aaKnown RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 C15orf59Q2T9L4 293 aaPredicted RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 C6orf163Q5TEZ5 329 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 FYB2Q5VWT5 728 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 KRT28Q7Z3Y7 464 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 ANKLE2Q86XL3 938 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 COL23A1Q86Y22 540 aaPredicted RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 NOSTRINQ8IVI9 506 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 GIPC2Q8TF65 315 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 PRICKLE1Q96MT3 831 aaPredicted RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 CEP63Q96MT8 703 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 MIPEPQ99797 713 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 CRNKL1Q9BZJ0 848 aaKnown RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 C12orf4Q9NQ89 552 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 CCDC177Q9NQR7 707 aaPredicted RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 THEGQ9P2T0 379 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 GPSM3Q9Y4H4 160 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 TMEM94Q12767 1356 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 SEC24DO94855 1032 aaPredicted RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 IGKV5-2P06315 115 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 AMPD1P23109 780 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 ADCY8P40145 1251 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 SLC1A4P43007 532 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 AP3M2P53677 418 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 DCAF6Q58WW2 860 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 CLVS1Q8IUQ0 354 aaPredicted RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 PRDM11Q9NQV5 511 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 OLFML3Q9NRN5 406 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 PCDHGA8Q9Y5G5 932 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 A0A0G2JLW4 131 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 H3BSA7 217 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 FOXD2O60548 495 aaPredicted RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 PPARGP37231 505 aaPredicted RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 DNM2P50570 870 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 PTK2Q05397 1052 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 MTFR1Q15390 333 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 CMTR1Q8N1G2 835 aaKnown RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 CENPSQ8N2Z9 138 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 VPS37AQ8NEZ2 397 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 FAM89AQ96GI7 184 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 PAGE5Q96GU1 130 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 C8orf48Q96LL4 319 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 INPP4AQ96PE3 977 aaPredicted RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 ORAI2Q96SN7 254 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 CSRNP2Q9H175 543 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 PABPC3Q9H361 631 aaKnown RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 PIH1D3Q9NQM4 214 aaKnown RBP11.29□□□□□ -0.6
TRERF1-203ENST00000372917 SACM1LQ9NTJ5 587 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 UVRAGQ9P2Y5 699 aa11.29□□□□□ -0.6
TRERF1-203ENST00000372917 MAST3O60307 1309 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 BCL9O00512 1426 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms