RNA–Protein interactions for RNA: ENST00000372616.1

CTPS1-201, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTPS1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-201ENST00000372616 CAPRIN2Q6IMN6 1127 aaKnown RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 LRRC55Q6ZSA7 311 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 NEK8Q86SG6 692 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 FAM228AQ86W67 206 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 NSMCE1Q8WV22 266 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 TBC1D5Q92609 795 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 ARMC5Q96C12 935 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 GRAMD1AQ96CP6 724 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 TBC1D31Q96DN5 1066 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 SPDL1Q96EA4 605 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 CCDC17Q96LX7 622 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 ZNF317Q96PQ6 595 aaPredicted RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 INSM2Q96T92 566 aaPredicted RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 SYT17Q9BSW7 474 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 ROPN1BQ9BZX4 212 aaPredicted RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 ZMYND12Q9H0C1 365 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 PABPC3Q9H361 631 aaKnown RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 ROPN1Q9HAT0 212 aaPredicted RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 LATS2Q9NRM7 1088 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 INTS9Q9NV88 658 aaKnown RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 PI4KBQ9UBF8 816 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 FAM8A1Q9UBU6 413 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 SERPINB13Q9UIV8 391 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 SALL4Q9UJQ4 1053 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 PCDHA6Q9UN73 950 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 NOC2LQ9Y3T9 749 aaKnown RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 PCDHA8Q9Y5H6 950 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 KCNMB2Q9Y691 235 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 KDM3AQ9Y4C1 1321 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 MYH4Q9Y623 1939 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 ESYT2A0FGR8 921 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 TGFBR3LH3BV60 316 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 GGPS1O95749 300 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 CYP2D6P10635 497 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 NEFHP12036 1026 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 NQO1P15559 274 aaKnown RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 GRNP28799 593 aaKnown RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 SSR1P43307 286 aaKnown RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 CDK8P49336 464 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 RWDD2BP57060 319 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 EDRF1Q3B7T1 1238 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 KRT79Q5XKE5 535 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 ERMP1Q7Z2K6 904 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 SLFN11Q7Z7L1 901 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 ANKRD13CQ8N6S4 541 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 ATXN2LQ8WWM7 1075 aaKnown RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 KLF16Q9BXK1 252 aaPredicted RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 NT5C3AQ9H0P0 336 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 CARD9Q9H257 536 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 EHD2Q9NZN4 543 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 SAP30BPQ9UHR5 308 aaKnown RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 AMFRQ9UKV5 643 aa7.73□□□□□ -1.17
CTPS1-201ENST00000372616 RPL26L1Q9UNX3 145 aaKnown RBP7.73□□□□□ -1.17
CTPS1-201ENST00000372616 ATRNL1Q5VV63 1379 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 SBF1O95248 1867 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 KLHL33A6NCF5 533 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 ZSCAN5CA6NGD5 496 aaPredicted RBP7.72□□□□□ -1.17
CTPS1-201ENST00000372616 STXBP3O00186 592 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 AHCYL1O43865 530 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 CLTAP09496 248 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 H2AFZP0C0S5 128 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 ATP2A2P16615 1042 aaKnown RBP7.72□□□□□ -1.17
CTPS1-201ENST00000372616 PAX7P23759 505 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 TMOD1P28289 359 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 WDR4P57081 412 aaKnown RBP7.72□□□□□ -1.17
CTPS1-201ENST00000372616 ZNF280AP59817 542 aaPredicted RBP7.72□□□□□ -1.17
CTPS1-201ENST00000372616 PTENP60484 403 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 POLR2FP61218 127 aaKnown RBP7.72□□□□□ -1.17
CTPS1-201ENST00000372616 TFAP4Q01664 338 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 MAP2K1Q02750 393 aaPredicted RBP7.72□□□□□ -1.17
CTPS1-201ENST00000372616 CCDC15Q0P6D6 951 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 MYO1EQ12965 1108 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 TNFAIP1Q13829 316 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 RAPGEF1Q13905 1077 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 INF2Q27J81 1249 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 ZNF746Q6NUN9 644 aaPredicted RBP7.72□□□□□ -1.17
CTPS1-201ENST00000372616 LRRC69Q6ZNQ3 347 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 H2AFVQ71UI9 128 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 BZW1Q7L1Q6 419 aaKnown RBP7.72□□□□□ -1.17
CTPS1-201ENST00000372616 FAM83AQ86UY5 434 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 PNMA8AQ86V59 439 aaPredicted RBP7.72□□□□□ -1.17
CTPS1-201ENST00000372616 CCDC65Q8IXS2 484 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 LMNTD2Q8IXW0 634 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 PRMT6Q96LA8 375 aaPredicted RBP7.72□□□□□ -1.17
CTPS1-201ENST00000372616 LSM14BQ9BX40 385 aaKnown RBP7.72□□□□□ -1.17
CTPS1-201ENST00000372616 SPZ1Q9BXG8 430 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 ZNF408Q9H9D4 720 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 SLC39A2Q9NP94 309 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.72□□□□□ -1.17
CTPS1-201ENST00000372616 SMARCAL1Q9NZC9 954 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 USP15Q9Y4E8 981 aaPredicted RBP7.72□□□□□ -1.17
CTPS1-201ENST00000372616 PLIN4Q96Q06 1357 aa7.72□□□□□ -1.17
CTPS1-201ENST00000372616 A0A087X0T9 212 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 hCG_1642624A0A1W2PR95 340 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 J3QL48 77 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 CETN3O15182 167 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 EPHB6O15197 1021 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 CCNT1O60563 726 aaKnown RBP7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms