RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TTC30AQ86WT1 665 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 DHX40Q8IX18 779 aaKnown RBP14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 C17orf50Q8WW18 174 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 INTUQ9ULD6 942 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 WDR91A4D1P6 747 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 STXBP3O00186 592 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 CALB1P05937 261 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 NR1H3Q13133 447 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 KRT39Q6A163 491 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 MAP3K14Q99558 947 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 ASNSD1Q9NWL6 643 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 MAGED2Q9UNF1 606 aaPredicted RBP14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 A8MXQ7 604 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 TRAPPC3O43617 180 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 ACSL3O95573 720 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 HSPA8P11142 646 aaKnown RBP14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 SMARCA1P28370 1054 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 VEPH1Q14D04 833 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 DUOXA2Q1HG44 320 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 BEND6Q5SZJ8 279 aaPredicted RBP14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 LRRC31Q6UY01 552 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 NRBF2Q96F24 287 aa14.1□□□□□ -0.15
RAPGEF1-201ENST00000372189 POLR1AO95602 1720 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 GNGT2O14610 69 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 DAB1O75553 588 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 RFC5P40937 340 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 CXCL9Q07325 125 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 MYLK4Q86YV6 388 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 PASD1Q8IV76 773 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 PARP9Q8IXQ6 854 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 ARHGAP18Q8N392 663 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 ST13P5Q8NFI4 369 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 PPP2R3CQ969Q6 453 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 TMEM143Q96AN5 459 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 MXRA8Q9BRK3 442 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 INTS2Q9H0H0 1204 aaKnown RBP14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 SYNGAP1Q96PV0 1343 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 CHGBP05060 677 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 PRR29P0C7W0 189 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 RECQLP46063 649 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 RUBCNQ92622 972 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 BCL9O00512 1426 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 MIF4GDA9UHW6 222 aaKnown RBP14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 KIAA0391O15091 583 aaKnown RBP14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 SLC9A5Q14940 896 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 ZC3H18Q86VM9 953 aaKnown RBP14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 PYROXD1Q8WU10 500 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 ADAMTS1Q9UHI8 967 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 GOLGA8RI6L899 631 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 NCF2P19878 526 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 ADORA2BP29275 332 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 LAMC2Q13753 1193 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 GATAD2AQ86YP4 633 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 MOV10L1Q9BXT6 1211 aaKnown RBP14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 STOML1Q9UBI4 398 aa14.09□□□□□ -0.15
RAPGEF1-201ENST00000372189 TARSL2A2RTX5 802 aaKnown RBP14.08□□□□□ -0.15
RAPGEF1-201ENST00000372189 CFAP73A6NFT4 308 aa14.08□□□□□ -0.15
RAPGEF1-201ENST00000372189 F8W8V4 182 aa14.08□□□□□ -0.15
RAPGEF1-201ENST00000372189 GYG2O15488 501 aa14.08□□□□□ -0.15
RAPGEF1-201ENST00000372189 SLC26A4O43511 780 aa14.08□□□□□ -0.15
RAPGEF1-201ENST00000372189 VCAM1P19320 739 aa14.08□□□□□ -0.15
RAPGEF1-201ENST00000372189 PLEKHH3Q7Z736 793 aa14.08□□□□□ -0.15
RAPGEF1-201ENST00000372189 CFAP36Q96G28 342 aa14.08□□□□□ -0.15
RAPGEF1-201ENST00000372189 HPCAL4Q9UM19 191 aa14.08□□□□□ -0.15
RAPGEF1-201ENST00000372189 RPS6KA5O75582 802 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 IL1RL1Q01638 556 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 OCA2Q04671 838 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 CRLF3Q8IUI8 442 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 VPS33BQ9H267 617 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 ADGRG1Q9Y653 693 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 ZBED1O96006 694 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 CASP2P42575 452 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 MAGOHP61326 146 aaKnown RBP14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 CAV1Q03135 178 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 GNASQ5JWF2 1037 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 DEPDC1BQ8WUY9 529 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 RAD21L1Q9H4I0 556 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 STMND1H3BQB6 276 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 ICAM1P05362 532 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 GCLCP48506 637 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 SEMA3FQ13275 785 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 EMC2Q15006 297 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 GRAMD1BQ3KR37 738 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 ERAP1Q9NZ08 941 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 FNDC3AQ9Y2H6 1198 aaKnown RBP14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 NPHP3-ACAD11A0A0J9YXS1 232 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 GNA15P30679 374 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 MRPS25P82663 173 aaKnown RBP14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 KRT73Q86Y46 540 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 OSBPL9Q96SU4 736 aa14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 TMA7Q9Y2S6 64 aaKnown RBP14.08□□□□□ -0.16
RAPGEF1-201ENST00000372189 PLSCR1O15162 318 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 ASAP2O43150 1006 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 DDNO94850 711 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 BACE1P56817 501 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 GSPT2Q8IYD1 628 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 PDIK1LQ8N165 341 aa14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 GUF1Q8N442 669 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-201ENST00000372189 ATP6V1G3Q96LB4 118 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms