RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 SLC5A5Q92911 643 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 UPF3AQ9H1J1 476 aaKnown RBP12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 KCNMB3Q9NPA1 279 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 NLRC4Q9NPP4 1024 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 PPANQ9NQ55 473 aaKnown RBP12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 SLC9A2Q9UBY0 812 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 MCM3APO60318 1980 aa12.33□□□□□ -0.43
TSPAN1-201ENST00000372003 NFASCO94856 1347 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 MYH7BA7E2Y1 1941 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 KBTBD13C9JR72 458 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 KCNK3O14649 394 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 SART1O43290 800 aaKnown RBP12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 MMP3P08254 477 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 ITIH4Q14624 930 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 KLHL7Q8IXQ5 586 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 CCDC65Q8IXS2 484 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 KLHDC9Q8NEP7 349 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 PPTC7Q8NI37 304 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 HPS3Q969F9 1004 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 EMID1Q96A84 441 aaPredicted RBP12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 VTI1AQ96AJ9 217 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 TLCD1Q96CP7 247 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 DNAJC19Q96DA6 116 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 FAM20AQ96MK3 541 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 GPR20Q99678 358 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 TEKT3Q9BXF9 490 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 OSBPL7Q9BZF2 842 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 RAB17Q9H0T7 212 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 ATP6V0A4Q9HBG4 840 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 TCEAL9Q9UHQ7 104 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 NENFQ9UMX5 172 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 STXBP5LQ9Y2K9 1186 aa12.33□□□□□ -0.44
TSPAN1-201ENST00000372003 A6NJR5 290 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 TBX3O15119 743 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 ASAP2O43150 1006 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 MGRN1O60291 552 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 PPFIA2O75334 1257 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 PSMD10O75832 226 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 CCNE2O96020 404 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 ASGR1P07306 291 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 GBP1P32455 592 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 HPDP32754 393 aaPredicted RBP12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 PSEN1P49768 467 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 ACTR2P61160 394 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 RIPK1Q13546 671 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 RAPGEF1Q13905 1077 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 CRYMQ14894 314 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 CXCL17Q6UXB2 119 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 CRELD2Q6UXH1 353 aaPredicted RBP12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 TMC3Q7Z5M5 1100 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 FRMD5Q7Z6J6 570 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 VPS36Q86VN1 386 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 FMNL3Q8IVF7 1028 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 SLFN12Q8IYM2 578 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 PCSK9Q8NBP7 692 aaKnown RBP12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 CCHCR1Q8TD31 782 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 SNX29Q8TEQ0 813 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 SEPT1Q8WYJ6 367 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 CCT6BQ92526 530 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 RAPGEF5Q92565 580 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 RIT2Q99578 217 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 UNC45AQ9H3U1 944 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 CD248Q9HCU0 757 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 PANK4Q9NVE7 773 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 ODF2LQ9ULJ1 636 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 PCDHA12Q9UN75 941 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 DAAM1Q9Y4D1 1078 aa12.32□□□□□ -0.44
TSPAN1-201ENST00000372003 LRRC37A2A6NM11 1700 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 GSTTP1A0A1W2PQM5 241 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 CFAP73A6NFT4 308 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 DNM1LO00429 736 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 CEP104O60308 925 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 NUDT17P0C025 328 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 DRD4P21917 467 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 TCF7P36402 384 aaPredicted RBP12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 SCTRP47872 440 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 ACLYP53396 1101 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 DRG2P55039 364 aaKnown RBP12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 BYSLQ13895 437 aaKnown RBP12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 SLMAPQ14BN4 828 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 DGKDQ16760 1214 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 ODF2Q5BJF6 829 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 ERMARDQ5T6L9 678 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 CCSAPQ6IQ19 270 aaPredicted RBP12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 DYMQ7RTS9 669 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 IRF2BP2Q7Z5L9 587 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 ANKS4BQ8N8V4 417 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 TPCN2Q8NHX9 752 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 DIS3LQ8TF46 1054 aaKnown RBP12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 PPP1R13LQ8WUF5 828 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 CHMP6Q96FZ7 201 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 PGM2Q96G03 612 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 NAP1L3Q99457 506 aaPredicted RBP12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 TXLNGYQ9BZA5 131 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 FAM129AQ9BZQ8 928 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 SENP6Q9GZR1 1112 aaPredicted RBP12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 CCDC134Q9H6E4 229 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 ADAMTS1Q9UHI8 967 aa12.31□□□□□ -0.44
TSPAN1-201ENST00000372003 UTP11Q9Y3A2 253 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms