RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 WDR49Q8IV35 697 aa28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 SEMA4DQ92854 862 aa28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 ADPGKQ9BRR6 497 aa28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 A0A1B0GUA9 196 aa28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 F8VZ95 297 aa28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 C4BPAP04003 597 aaKnown RBP28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 DARSP14868 501 aaKnown RBP28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 SOX5P35711 763 aa28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 KIF11P52732 1056 aa28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 WNT7BP56706 349 aa28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 CCSAPQ6IQ19 270 aaPredicted RBP28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 APBB1IPQ7Z5R6 666 aaPredicted RBP28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 CDR2LQ86X02 465 aaPredicted RBP28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 CPB2Q96IY4 423 aa28.43■■■□□ 2.14
ATPAF1-202ENST00000371937 MYCNP04198 464 aaPredicted RBP28.42■■■□□ 2.14
ATPAF1-202ENST00000371937 EIF4BP23588 611 aaKnown RBP28.42■■■□□ 2.14
ATPAF1-202ENST00000371937 PRKCIP41743 596 aa28.42■■■□□ 2.14
ATPAF1-202ENST00000371937 NT5C1BQ96P26 610 aa28.42■■■□□ 2.14
ATPAF1-202ENST00000371937 OSMRQ99650 979 aa28.42■■■□□ 2.14
ATPAF1-202ENST00000371937 LCA5LO95447 670 aa28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 CLTAP09496 248 aa28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 BIRC3Q13489 604 aa28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 LMBRD2Q68DH5 695 aaPredicted RBP28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 CATSPER4Q7RTX7 472 aa28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 FAM81BQ96LP2 452 aa28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 RPF1Q9H9Y2 349 aaKnown RBP28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 IL18RAPO95256 599 aa28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 INHAP05111 366 aa28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 RPLP2P05387 115 aaKnown RBP28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 MFAP3P55082 362 aa28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 ASTE1Q2TB18 679 aaPredicted RBP28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 ARHGAP29Q52LW3 1261 aa28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 TDRD10Q5VZ19 366 aaKnown RBP28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 SESTD1Q86VW0 696 aa28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 ARHGEF19Q8IW93 802 aa28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 BEGAINQ9BUH8 593 aa28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 CDHR5Q9HBB8 845 aa28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 REXO2Q9Y3B8 237 aaKnown RBP28.41■■■□□ 2.14
ATPAF1-202ENST00000371937 PTPRJQ12913 1337 aa28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 TRIP12Q14669 1992 aaPredicted RBP28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 PCNTO95613 3336 aa28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 LRRN2O75325 713 aa28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 CABYRO75952 493 aa28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 ANXA13P27216 316 aa28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 GRK4P32298 578 aa28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 CRYBB1P53674 252 aaPredicted RBP28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 ENOX2Q16206 610 aaKnown RBP28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 ARHGAP44Q17R89 818 aa28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 FAM47CQ5HY64 1035 aa28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 WDR44Q5JSH3 913 aa28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 RSPH3Q86UC2 560 aa28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 GPIHBP1Q8IV16 184 aa28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 FAM212AQ96EL1 285 aa28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 HAUS4Q9H6D7 363 aa28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 HMX1Q9NP08 348 aaPredicted RBP28.4■■■□□ 2.14
ATPAF1-202ENST00000371937 OSTNP61366 133 aa28.39■■■□□ 2.14
ATPAF1-202ENST00000371937 PPM1KQ8N3J5 372 aa28.39■■■□□ 2.14
ATPAF1-202ENST00000371937 GPR88Q9GZN0 384 aa28.39■■■□□ 2.14
ATPAF1-202ENST00000371937 LZTFL1Q9NQ48 299 aa28.39■■■□□ 2.14
ATPAF1-202ENST00000371937 B4GALT4O60513 344 aa28.39■■■□□ 2.13
ATPAF1-202ENST00000371937 GFPT2O94808 682 aa28.39■■■□□ 2.13
ATPAF1-202ENST00000371937 HLA-DRAP01903 254 aa28.39■■■□□ 2.13
ATPAF1-202ENST00000371937 STAG3L1P0CL83 205 aa28.39■■■□□ 2.13
ATPAF1-202ENST00000371937 AXLP30530 894 aa28.39■■■□□ 2.13
ATPAF1-202ENST00000371937 PIK3CAP42336 1068 aa28.39■■■□□ 2.13
ATPAF1-202ENST00000371937 SNX17Q15036 470 aa28.39■■■□□ 2.13
ATPAF1-202ENST00000371937 DUOXA2Q1HG44 320 aa28.39■■■□□ 2.13
ATPAF1-202ENST00000371937 DCAF4L1Q3SXM0 396 aa28.39■■■□□ 2.13
ATPAF1-202ENST00000371937 KIAA1328Q86T90 577 aa28.39■■■□□ 2.13
ATPAF1-202ENST00000371937 CEP120Q8N960 986 aa28.39■■■□□ 2.13
ATPAF1-202ENST00000371937 PHACTR2O75167 634 aa28.38■■■□□ 2.13
ATPAF1-202ENST00000371937 FGFR4P22455 802 aa28.38■■■□□ 2.13
ATPAF1-202ENST00000371937 ETF1P62495 437 aaKnown RBP28.38■■■□□ 2.13
ATPAF1-202ENST00000371937 GDF6Q6KF10 455 aaPredicted RBP28.38■■■□□ 2.13
ATPAF1-202ENST00000371937 ZNF662Q6ZS27 426 aa28.38■■■□□ 2.13
ATPAF1-202ENST00000371937 ENOSF1Q7L5Y1 443 aa28.38■■■□□ 2.13
ATPAF1-202ENST00000371937 VPS36Q86VN1 386 aa28.38■■■□□ 2.13
ATPAF1-202ENST00000371937 OR5B17Q8NGF7 314 aa28.38■■■□□ 2.13
ATPAF1-202ENST00000371937 C1orf112Q9NSG2 853 aa28.38■■■□□ 2.13
ATPAF1-202ENST00000371937 M0QZ92 97 aa28.37■■■□□ 2.13
ATPAF1-202ENST00000371937 EVI5O60447 810 aa28.37■■■□□ 2.13
ATPAF1-202ENST00000371937 PTK2Q05397 1052 aa28.37■■■□□ 2.13
ATPAF1-202ENST00000371937 NOTUMQ6P988 496 aa28.37■■■□□ 2.13
ATPAF1-202ENST00000371937 TXLNBQ8N3L3 684 aa28.37■■■□□ 2.13
ATPAF1-202ENST00000371937 LUC7LQ9NQ29 371 aaKnown RBP28.37■■■□□ 2.13
ATPAF1-202ENST00000371937 RBAK-RBAKDNI3L0D1 243 aa28.36■■■□□ 2.13
ATPAF1-202ENST00000371937 FOXN3O00409 490 aaPredicted RBP28.36■■■□□ 2.13
ATPAF1-202ENST00000371937 HOXA11P31270 313 aaPredicted RBP28.36■■■□□ 2.13
ATPAF1-202ENST00000371937 CYP27A1Q02318 531 aa28.36■■■□□ 2.13
ATPAF1-202ENST00000371937 GCNT1Q02742 428 aa28.36■■■□□ 2.13
ATPAF1-202ENST00000371937 SLC18A3Q16572 532 aa28.36■■■□□ 2.13
ATPAF1-202ENST00000371937 SLC27A1Q6PCB7 646 aa28.36■■■□□ 2.13
ATPAF1-202ENST00000371937 HELQQ8TDG4 1101 aa28.36■■■□□ 2.13
ATPAF1-202ENST00000371937 IFIH1Q9BYX4 1025 aaKnown RBP28.36■■■□□ 2.13
ATPAF1-202ENST00000371937 CELF4Q9BZC1 486 aaKnown RBP28.36■■■□□ 2.13
ATPAF1-202ENST00000371937 TRIM17Q9Y577 477 aa28.36■■■□□ 2.13
ATPAF1-202ENST00000371937 CXCL8P10145 99 aa28.36■■■□□ 2.13
ATPAF1-202ENST00000371937 SERINC5Q86VE9 423 aa28.36■■■□□ 2.13
ATPAF1-202ENST00000371937 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.36■■■□□ 2.13
ATPAF1-202ENST00000371937 PCDHA13Q9Y5I0 950 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms