RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 UNC45AQ9H3U1 944 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 YY1AP1Q9H869 796 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 ELP3Q9H9T3 547 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 TRPC7Q9HCX4 862 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 NDE1Q9NXR1 346 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 STX18Q9P2W9 335 aaKnown RBP23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 GGT7Q9UJ14 662 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 AGAP1Q9UPQ3 857 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 FAM205CA6NFA0 338 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 C12orf60Q5U649 245 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 PPHLN1Q8NEY8 458 aaKnown RBP23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 MTBPQ96DY7 904 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 SPATA4Q8NEY3 305 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 TNIP3Q96KP6 325 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 ZFATQ9P243 1243 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 CCDC78A2IDD5 438 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 ASB14A6NK59 587 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 PDXKO00764 312 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 KCNQ2O43526 872 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 GUCY1A3Q02108 690 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 ACBD5Q5T8D3 534 aaPredicted RBP23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 ICA1LQ8NDH6 482 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 WDR24Q96S15 920 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 CHGBP05060 677 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 EFNA5P52803 228 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 SP8Q8IXZ3 490 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 RFWD2Q8NHY2 731 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 TRIM45Q9H8W5 580 aaPredicted RBP23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 HERC5Q9UII4 1024 aaKnown RBP23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 POLRMTO00411 1230 aaKnown RBP23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 VEPH1Q14D04 833 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 COBLL1Q53SF7 1204 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 SLC35G2Q8TBE7 412 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 USP33Q8TEY7 942 aa23.37■■□□□ 1.33
TM9SF3-201ENST00000371142 ADRA2BP18089 450 aa23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 ERFP50548 548 aa23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 ACTR2P61160 394 aa23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 KCNB1Q14721 858 aa23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 EML4Q9HC35 981 aaKnown RBP23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 PNPLA7Q6ZV29 1317 aa23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 MMS22LQ6ZRQ5 1243 aa23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 YIPF3Q9GZM5 350 aa23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 HSPA9P38646 679 aaKnown RBP23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 HSD17B4P51659 736 aa23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 EPAS1Q99814 870 aa23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 DYRK4Q9NR20 520 aa23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 RAD51Q06609 339 aa23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 P3H1Q32P28 736 aa23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 MAP3K20Q9NYL2 800 aaKnown RBP23.36■■□□□ 1.33
TM9SF3-201ENST00000371142 RAD23BP54727 409 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 KYAT1Q16773 422 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 ZNF467Q7Z7K2 595 aaPredicted RBP23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 NFIXQ14938 502 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 C18orf8Q96DM3 657 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 TRIM51Q9BSJ1 452 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 SNX9Q9Y5X1 595 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 HMBSP08397 361 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 GFAPP14136 432 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 CHRNA5P30532 468 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 NBPF9Q3BBW0 867 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 ANO5Q75V66 913 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 ATL2Q8NHH9 583 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 NSUN4Q96CB9 384 aaKnown RBP23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 SLC16A3O15427 465 aaKnown RBP23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 SLC1A1P43005 524 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 CHP1Q99653 195 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 AURKCQ9UQB9 309 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 CCDC22O60826 627 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 HOXD10P28358 340 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 APPL2Q8NEU8 664 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 TRABDQ9H4I3 376 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 RUBCNLQ9H714 662 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 APEX2Q9UBZ4 518 aa23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.35■■□□□ 1.33
TM9SF3-201ENST00000371142 TCP11X1B4DZS4 312 aa23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 COPB2P35606 906 aa23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 OTULINQ96BN8 352 aa23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 REEP2Q9BRK0 252 aa23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 CLEC10AQ8IUN9 316 aa23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 TRIM9Q9C026 710 aa23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 TRIM62Q9BVG3 475 aa23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 ZC3H4Q9UPT8 1303 aaKnown RBP23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 CHUKO15111 745 aa23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 ENO1P06733 434 aaKnown RBP23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 RCOR2Q8IZ40 523 aa23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 SETD1BQ9UPS6 1966 aaKnown RBP23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 PARP9Q8IXQ6 854 aa23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 ALDH8A1Q9H2A2 487 aaPredicted RBP23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 MAD2L2Q9UI95 211 aa23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 ZDHHC9Q9Y397 364 aa23.34■■□□□ 1.33
TM9SF3-201ENST00000371142 CTSHP09668 335 aa23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 PDIA5Q14554 519 aa23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 MCEEQ96PE7 176 aa23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 TMEM117Q9H0C3 514 aa23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 MYBP10242 640 aa23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 KDSRQ06136 332 aa23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 FMR1Q06787 632 aaKnown RBP eCLIP23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 ATG9AQ7Z3C6 839 aa23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 DDX53Q86TM3 631 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms