RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 PSMD5Q16401 504 aa12.23□□□□□ -0.45
EXOSC1-204ENST00000370902 CALCRLQ16602 461 aa12.23□□□□□ -0.45
EXOSC1-204ENST00000370902 ME3Q16798 604 aa12.23□□□□□ -0.45
EXOSC1-204ENST00000370902 DCLRE1AQ6PJP8 1040 aa12.23□□□□□ -0.45
EXOSC1-204ENST00000370902 C1orf210Q8IVY1 113 aa12.23□□□□□ -0.45
EXOSC1-204ENST00000370902 C3orf58Q8NDZ4 430 aa12.23□□□□□ -0.45
EXOSC1-204ENST00000370902 FGF13Q92913 245 aa12.23□□□□□ -0.45
EXOSC1-204ENST00000370902 GTF3C6Q969F1 213 aa12.23□□□□□ -0.45
EXOSC1-204ENST00000370902 PRIMPOLQ96LW4 560 aa12.23□□□□□ -0.45
EXOSC1-204ENST00000370902 TRIM6Q9C030 488 aaPredicted RBP12.23□□□□□ -0.45
EXOSC1-204ENST00000370902 SNTG2Q9NY99 539 aa12.23□□□□□ -0.45
EXOSC1-204ENST00000370902 CDH7Q9ULB5 785 aa12.23□□□□□ -0.45
EXOSC1-204ENST00000370902 PCDHA12Q9UN75 941 aa12.23□□□□□ -0.45
EXOSC1-204ENST00000370902 MTF2Q9Y483 593 aaPredicted RBP12.23□□□□□ -0.45
EXOSC1-204ENST00000370902 CITO14578 2027 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 LRRIQ4A6NIV6 560 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 TMEM189-UBE2V1I3L0A0 370 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 CCL16O15467 120 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 NEMFO60524 1076 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 JAK2O60674 1132 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 HNRNPA1P09651 372 aaKnown RBP eCLIP12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 FGFR3P22607 806 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 CREMQ03060 361 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 SLC5A9Q2M3M2 681 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 FAM171A1Q5VUB5 890 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 CATSPER3Q86XQ3 398 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 NPAS3Q8IXF0 933 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 DCLK2Q8N568 766 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 NECAB1Q8N987 351 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 PPP1R10Q96QC0 940 aaKnown RBP12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 TTPALQ9BTX7 342 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 SEMA4AQ9H3S1 761 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 PIDD1Q9HB75 910 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 PRMT7Q9NVM4 692 aaPredicted RBP12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 DNMT3BQ9UBC3 853 aaKnown RBP12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 MTRRQ9UBK8 725 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 PARP2Q9UGN5 583 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 SIT1Q9Y3P8 196 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 ZFP37Q9Y6Q3 630 aaPredicted RBP12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 TSC2P49815 1807 aa12.22□□□□□ -0.45
EXOSC1-204ENST00000370902 NCANO14594 1321 aa12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 MEFVO15553 781 aaPredicted RBP12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 TADA2AO75478 443 aa12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 XRCC6P12956 609 aaKnown RBP eCLIP12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 FCARP24071 287 aa12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 TXKP42681 527 aa12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 FZD5Q13467 585 aa12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 RAB33AQ14088 237 aa12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 ELMSAN1Q6PJG2 1045 aa12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 MAEAQ7L5Y9 396 aa12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 NOSTRINQ8IVI9 506 aa12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 DIS3L2Q8IYB7 885 aaKnown RBP12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 HACE1Q8IYU2 909 aa12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 ZNF687Q8N1G0 1237 aa12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 SLC7A14Q8TBB6 771 aa12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 NELL1Q92832 810 aa12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 DDX27Q96GQ7 796 aaKnown RBP12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 KIFC3Q9BVG8 833 aa12.21□□□□□ -0.45
EXOSC1-204ENST00000370902 KIF26AQ9ULI4 1882 aaPredicted RBP12.21□□□□□ -0.46
EXOSC1-204ENST00000370902 SPTBN2O15020 2390 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 KANSL1LA0AUZ9 987 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 NR1I2O75469 434 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 BAG4O95429 457 aaKnown RBP12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 PRKCBP05771 671 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 XBP1P17861 261 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 TARSP26639 723 aaKnown RBP12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 SOX4Q06945 474 aaPredicted RBP12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 SNW1Q13573 536 aaKnown RBP12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 MLF2Q15773 248 aaPredicted RBP12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 ECM1Q16610 540 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 GLRA4Q5JXX5 417 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 NT5DC1Q5TFE4 455 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 KIAA2013Q8IYS2 634 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 CEP120Q8N960 986 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 KXD1Q9BQD3 176 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 PLA2G2FQ9BZM2 168 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 GOLGA2P5Q9HBQ8 144 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 TUFT1Q9NNX1 390 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 DLL3Q9NYJ7 618 aa12.2□□□□□ -0.46
EXOSC1-204ENST00000370902 STK25O00506 426 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 ACKR2O00590 384 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 ABLIM1O14639 778 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 N4BP3O15049 544 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 MARCH6O60337 910 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 TBC1D4O60343 1298 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 THP07101 528 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 TDGF1P13385 188 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 TKTP29401 623 aaKnown RBP12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 OR1D2P34982 312 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 RBM25P49756 843 aaKnown RBP12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 CLCNKBP51801 687 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 FOSBP53539 338 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 NCBP1Q09161 790 aaKnown RBP12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 XKR4Q5GH76 650 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 PRSS36Q5K4E3 855 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 PPM1LQ5SGD2 360 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 AXDND1Q5T1B0 1012 aaPredicted RBP12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 LIN9Q5TKA1 542 aa12.19□□□□□ -0.46
EXOSC1-204ENST00000370902 TAS1R3Q7RTX0 852 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms