RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 BMS1Q14692 1282 aaKnown RBP12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 KARSQ15046 597 aaKnown RBP12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 TMEM132AQ24JP5 1023 aa12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 SPECC1Q5M775 1068 aa12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 CES5AQ6NT32 575 aa12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 RSPO2Q6UXX9 243 aaPredicted RBP12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 TRIM67Q6ZTA4 783 aa12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 LNX1Q8TBB1 728 aaPredicted RBP12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 RIN2Q8WYP3 895 aaPredicted RBP12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 ZNF707Q96C28 371 aaPredicted RBP12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 ASIC4Q96FT7 647 aa12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 CLSTN3Q9BQT9 956 aa12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 KMT5AQ9NQR1 393 aa12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 MAN1C1Q9NR34 630 aa12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
EXOSC1-202ENST00000370885 VPS37CA5D8V6 355 aaPredicted RBP12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 TMEM221A6NGB7 291 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 I3L4J1 428 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 M0R296 226 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 TGM5O43548 720 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 TADA2AO75478 443 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 BRD1O95696 1058 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 PLS3P13797 630 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 PLCG1P19174 1290 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 SYT1P21579 422 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 GRM5P41594 1212 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 MTHFRP42898 656 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 CLCNKBP51801 687 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 DMP1Q13316 513 aaPredicted RBP12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 DHX8Q14562 1220 aaKnown RBP12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 MCM6Q14566 821 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 PTPN21Q16825 1174 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 USP41Q3LFD5 358 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 DCAF4L1Q3SXM0 396 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 FAM171A1Q5VUB5 890 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 PPFIBP1Q86W92 1011 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 TMEM87AQ8NBN3 555 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 SPIRE2Q8WWL2 714 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 EPSTI1Q96J88 318 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 DRC1Q96MC2 740 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 NECTIN4Q96NY8 510 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 FIZ1Q96SL8 496 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 ADPGKQ9BRR6 497 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 SFXN1Q9H9B4 322 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 ZDBF2Q9HCK1 2354 aa12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 PDCD11Q14690 1871 aaKnown RBP12.06□□□□□ -0.48
EXOSC1-202ENST00000370885 CCDC195A0A1B0GUA6 201 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 PAPLNO95428 1278 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 ADH1AP07327 375 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 MARCKSP29966 332 aaPredicted RBP12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 MCM4P33991 863 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 BRCC3P46736 316 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 NCKAP1LP55160 1127 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 UPP1Q16831 310 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 SLC10A6Q3KNW5 377 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 ZNF568Q3ZCX4 644 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 ATAT1Q5SQI0 421 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 ZBTB41Q5SVQ8 909 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 IER5LQ5T953 404 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 BRAPQ7Z569 592 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 KREMEN2Q8NCW0 462 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 C18orf25Q96B23 403 aaPredicted RBP12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 SNX27Q96L92 541 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 RIPOR3Q96MK2 946 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 CLIC6Q96NY7 704 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 REEP2Q9BRK0 252 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 MRPL4Q9BYD3 311 aaKnown RBP12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 NT5C3AQ9H0P0 336 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 IKZF4Q9H2S9 585 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 C17orf75Q9HAS0 396 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 FNIP2Q9P278 1114 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 STK39Q9UEW8 545 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 LIMD1Q9UGP4 676 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 FBXO2Q9UK22 296 aaPredicted RBP12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 MTMR6Q9Y217 621 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 DOCK8Q8NF50 2099 aa12.05□□□□□ -0.48
EXOSC1-202ENST00000370885 CITO14578 2027 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 NOTCH4Q99466 2003 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 KMT2EQ8IZD2 1858 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 NR1I2O75469 434 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 GLUD1P00367 558 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 HSP90AA1P07900 732 aaKnown RBP12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 MCF2P10911 925 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 HARSP12081 509 aaKnown RBP12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 FGFR3P22607 806 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 PLA2G5P39877 138 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 ZNF131P52739 623 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 SLC39A4Q6P5W5 647 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 MPZL3Q6UWV2 235 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 BMP8AQ7Z5Y6 402 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 GPBP1Q86WP2 473 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 CEP57Q86XR8 500 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 GPR65Q8IYL9 337 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 CMASQ8NFW8 434 aaPredicted RBP12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 PIK3R5Q8WYR1 880 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 RAD54LQ92698 747 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 AK8Q96MA6 479 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 TTPALQ9BTX7 342 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 TIPINQ9BVW5 301 aa12.04□□□□□ -0.48
EXOSC1-202ENST00000370885 SF3B1O75533 1304 aaKnown RBP eCLIP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms