RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 NXF3Q9H4D5 531 aaKnown RBP16.66■□□□□ 0.26
SS18L1-202ENST00000370848 PDZD7Q9H5P4 517 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 RXFP1Q9HBX9 757 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 KMT5AQ9NQR1 393 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 ARHGAP28Q9P2N2 729 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 STK17AQ9UEE5 414 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 RCOR1Q9UKL0 485 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 MYO10Q9HD67 2058 aa16.66■□□□□ 0.26
SS18L1-202ENST00000370848 A0A1B0GUA9 196 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 ARL5CA6NH57 179 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 MYMKA6NI61 221 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 ACKR2O00590 384 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 STAT6P42226 847 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 PRPF4BQ13523 1007 aaKnown RBP16.65■□□□□ 0.26
SS18L1-202ENST00000370848 ATL3Q6DD88 541 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 DYMQ7RTS9 669 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 TDRD5Q8NAT2 981 aaKnown RBP16.65■□□□□ 0.26
SS18L1-202ENST00000370848 GSTCDQ8NEC7 633 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 HDAC7Q8WUI4 952 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 LEO1Q8WVC0 666 aaPredicted RBP16.65■□□□□ 0.26
SS18L1-202ENST00000370848 PRIMPOLQ96LW4 560 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 RPS6KC1Q96S38 1066 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 IRF2BPLQ9H1B7 796 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 CHST7Q9NS84 486 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 KCND2Q9NZV8 630 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 CFAP45Q9UL16 551 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 SSX2IPQ9Y2D8 614 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 FAN1Q9Y2M0 1017 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 GIT1Q9Y2X7 761 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 PHLPP2Q6ZVD8 1323 aa16.65■□□□□ 0.26
SS18L1-202ENST00000370848 VPS13AQ96RL7 3174 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 FAM13AO94988 1023 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 KRT18P05783 430 aaKnown RBP16.64■□□□□ 0.25
SS18L1-202ENST00000370848 ITGA4P13612 1032 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 NCBP1Q09161 790 aaKnown RBP16.64■□□□□ 0.25
SS18L1-202ENST00000370848 E2F4Q16254 413 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 TMEM132AQ24JP5 1023 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 KIAA0319Q5VV43 1072 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 SLC27A1Q6PCB7 646 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 CCDC73Q6ZRK6 1079 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 C12orf76Q8N812 135 aaPredicted RBP16.64■□□□□ 0.25
SS18L1-202ENST00000370848 TMEM161BQ8NDZ6 487 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 SPIRE2Q8WWL2 714 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 STAMQ92783 540 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 GBP3Q9H0R5 595 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 ZHX3Q9H4I2 956 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 GDPD2Q9HCC8 539 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 MRPL17Q9NRX2 175 aaKnown RBP16.64■□□□□ 0.25
SS18L1-202ENST00000370848 ODF2LQ9ULJ1 636 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 CFAP54Q96N23 3096 aa16.64■□□□□ 0.25
SS18L1-202ENST00000370848 MTCL1Q9Y4B5 1905 aaKnown RBP16.63■□□□□ 0.25
SS18L1-202ENST00000370848 K7ERI5 159 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 POMCP01189 267 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 AKAP5P24588 427 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 MLH1P40692 756 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 ZNF131P52739 623 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 EFNA5P52803 228 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 KRT85P78386 507 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 DSG1Q02413 1049 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 MYCT1Q8N699 235 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 FEZF2Q8TBJ5 459 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 DDX12PQ92771 950 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 DHX58Q96C10 678 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 FIZ1Q96SL8 496 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 TARS2Q9BW92 718 aaKnown RBP16.63■□□□□ 0.25
SS18L1-202ENST00000370848 TRIM6Q9C030 488 aaPredicted RBP16.63■□□□□ 0.25
SS18L1-202ENST00000370848 TMEM134Q9H6X4 195 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 C17orf75Q9HAS0 396 aa16.63■□□□□ 0.25
SS18L1-202ENST00000370848 PROB1E7EW31 1015 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 N4BP3O15049 544 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 TBCAO75347 108 aaKnown RBP16.62■□□□□ 0.25
SS18L1-202ENST00000370848 PDGFBP01127 241 aaPredicted RBP16.62■□□□□ 0.25
SS18L1-202ENST00000370848 URODP06132 367 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 ADH1AP07327 375 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 WEE2P0C1S8 567 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 MAPTP10636 758 aaKnown RBP16.62■□□□□ 0.25
SS18L1-202ENST00000370848 NCKAP1LP55160 1127 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 ATF7IP2Q5U623 682 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 RESP18Q5W5W9 173 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 KANK3Q6NY19 840 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 TMC5Q6UXY8 1006 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 CCDC149Q6ZUS6 474 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 SV2BQ7L1I2 683 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 OTOP3Q7RTS5 596 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 DNAJC19Q96DA6 116 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 SPATA32Q96LK8 384 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 ZFP42Q96MM3 310 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 FAM193BQ96PV7 902 aaPredicted RBP16.62■□□□□ 0.25
SS18L1-202ENST00000370848 GAD1Q99259 594 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 PHOX2BQ99453 314 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 NTPCRQ9BSD7 190 aaKnown RBP16.62■□□□□ 0.25
SS18L1-202ENST00000370848 CXCL16Q9H2A7 254 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 PARVGQ9HBI0 331 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 TSHZ2Q9NRE2 1034 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 MIOSQ9NXC5 875 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 KLK14Q9P0G3 267 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 DPP7Q9UHL4 492 aa16.62■□□□□ 0.25
SS18L1-202ENST00000370848 K7ENM7 598 aa16.61■□□□□ 0.25
SS18L1-202ENST00000370848 TEX28O15482 410 aa16.61■□□□□ 0.25
SS18L1-202ENST00000370848 GALR2O43603 387 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms