RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 RWDD3Q9Y3V2 267 aa16.9■□□□□ 0.3
PRPF38B-202ENST00000370022 TTC26A0AVF1 554 aa16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 THP07101 528 aa16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 CA3P07451 260 aa16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 NR2F2P24468 414 aa16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 DNAJB2P25686 324 aa16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 PBX2P40425 430 aa16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 FKBP3Q00688 224 aaKnown RBP16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 RNASELQ05823 741 aaKnown RBP16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 SNRNP35Q16560 246 aaKnown RBP16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 PAN2Q504Q3 1202 aaKnown RBP16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 KLHL10Q6JEL2 608 aa16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 BRSK2Q8IWQ3 736 aa16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 NELFBQ8WX92 580 aa16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 SLC28A3Q9HAS3 691 aa16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 AAASQ9NRG9 546 aa16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 SLC38A7Q9NVC3 462 aa16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 ANO10Q9NW15 660 aa16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 RBAKQ9NYW8 714 aaPredicted RBP16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 FRMD4BQ9Y2L6 1034 aa16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 YBX2Q9Y2T7 364 aaKnown RBP16.89■□□□□ 0.3
PRPF38B-202ENST00000370022 RANBP2P49792 3224 aaKnown RBP16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 TMEM265A0A087WTH1 108 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 SMIM28A0A1B0GU29 152 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 LINC01553A4QN01 128 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 GOLGA8IPA6NC78 632 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 GOLGA8JA6NMD2 632 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 POMCP01189 267 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 MYOGP15173 224 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 ERCC5P28715 1186 aaPredicted RBP16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 SCNN1GP51170 649 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 ADAM9Q13443 819 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 SURF1Q15526 300 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 DPCR1Q3MIW9 517 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 ANKRD40Q6AI12 368 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 NT5DC4Q86YG4 428 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 CLP1Q92989 425 aaKnown RBP16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 TIFAQ96CG3 184 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 SAMD11Q96NU1 681 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 FAM193BQ96PV7 902 aaPredicted RBP16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 RWDD2AQ9UIY3 292 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 DERAQ9Y315 318 aa16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 MRPL42Q9Y6G3 142 aaKnown RBP16.89■□□□□ 0.29
PRPF38B-202ENST00000370022 LCHNA4D1U4 455 aa16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 PTGESO14684 152 aa16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 CETN3O15182 167 aa16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 MAPK13O15264 365 aa16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 LAG3P18627 525 aa16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 AFF1P51825 1210 aaKnown RBP16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 STX1AQ16623 288 aa16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 LRRC55Q6ZSA7 311 aa16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 CBWD2Q8IUF1 395 aa16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 ZC3H3Q8IXZ2 948 aaKnown RBP16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 NOC3LQ8WTT2 800 aaKnown RBP16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 PPP1R10Q96QC0 940 aaKnown RBP16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 NKX2-4Q9H2Z4 354 aa16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 CWH43Q9H720 699 aa16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 MIOSQ9NXC5 875 aa16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 CTNND2Q9UQB3 1225 aa16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 C2CD2Q9Y426 696 aa16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 FNDC1Q4ZHG4 1894 aaPredicted RBP16.88■□□□□ 0.29
PRPF38B-202ENST00000370022 LACTBL1A8MY62 500 aa16.87■□□□□ 0.29
PRPF38B-202ENST00000370022 MEFVO15553 781 aaPredicted RBP16.87■□□□□ 0.29
PRPF38B-202ENST00000370022 XPOTO43592 962 aaKnown RBP16.87■□□□□ 0.29
PRPF38B-202ENST00000370022 PMS1P54277 932 aaKnown RBP16.87■□□□□ 0.29
PRPF38B-202ENST00000370022 DSC1Q08554 894 aa16.87■□□□□ 0.29
PRPF38B-202ENST00000370022 TUSC3Q13454 348 aa16.87■□□□□ 0.29
PRPF38B-202ENST00000370022 SPOUT1Q5T280 376 aaKnown RBP16.87■□□□□ 0.29
PRPF38B-202ENST00000370022 PPP2R2DQ66LE6 453 aa16.87■□□□□ 0.29
PRPF38B-202ENST00000370022 TTI2Q6NXR4 508 aa16.87■□□□□ 0.29
PRPF38B-202ENST00000370022 USP37Q86T82 979 aa16.87■□□□□ 0.29
PRPF38B-202ENST00000370022 ZSWIM2Q8NEG5 633 aa16.87■□□□□ 0.29
PRPF38B-202ENST00000370022 CEP63Q96MT8 703 aa16.87■□□□□ 0.29
PRPF38B-202ENST00000370022 TMEM175Q9BSA9 504 aa16.87■□□□□ 0.29
PRPF38B-202ENST00000370022 MKNK1Q9BUB5 465 aa16.87■□□□□ 0.29
PRPF38B-202ENST00000370022 TRIM49BA6NDI0 452 aa16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 CYP3A5P20815 502 aa16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 PSMC2P35998 433 aaKnown RBP16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 ALDH7A1P49419 539 aaKnown RBP16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 TAP1Q03518 808 aa16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 ENPEPQ07075 957 aa16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 PSMD6Q15008 389 aa16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 CEP135Q66GS9 1140 aa16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 RDH13Q8NBN7 331 aa16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 FAM212AQ96EL1 285 aa16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 KIF12Q96FN5 646 aa16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 MFSD14AQ96MC6 490 aa16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 UROC1Q96N76 676 aa16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 ZMAT2Q96NC0 199 aaKnown RBP16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 TGS1Q96RS0 853 aaKnown RBP16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 PLVAPQ9BX97 442 aa16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 NRDE2Q9H7Z3 1164 aa16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 UBQLN1Q9UMX0 589 aaKnown RBP16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 PLAGL2Q9UPG8 496 aa16.86■□□□□ 0.29
PRPF38B-202ENST00000370022 SLC16A3O15427 465 aaKnown RBP16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 DDHD2O94830 711 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 FGFR1OPO95684 399 aaKnown RBP16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 ALDH2P05091 517 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 LINC00271P0C7V0 271 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 CCDC192P0DO97 292 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms