RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 SGO2Q562F6 1265 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 SLC45A4Q5BKX6 768 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 CBWD3Q5JTY5 395 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 CBWD5Q5RIA9 395 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 LRRC74BQ6ZQY2 392 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 C16orf86Q6ZW13 317 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 CATSPER3Q86XQ3 398 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 CCDC125Q86Z20 511 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 RIBC1Q8N443 379 aaPredicted RBP10.71□□□□□ -0.69
HIPK1-206ENST00000369559 MARCH10Q8NA82 808 aaPredicted RBP10.71□□□□□ -0.69
HIPK1-206ENST00000369559 C1orf54Q8WWF1 131 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 GATA6Q92908 595 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 MIPEPQ99797 713 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 DMAP1Q9NPF5 467 aaPredicted RBP10.71□□□□□ -0.69
HIPK1-206ENST00000369559 PDP2Q9P2J9 529 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 RSPH10B2B2RC85 870 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 FOXN3O00409 490 aaPredicted RBP10.71□□□□□ -0.69
HIPK1-206ENST00000369559 TGFB1I1O43294 461 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 SPAG7O75391 227 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 MTA2O94776 668 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 RSPH10BP0C881 870 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 SF3B3Q15393 1217 aaKnown RBP10.71□□□□□ -0.69
HIPK1-206ENST00000369559 PDK4Q16654 411 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 INTS5Q6P9B9 1019 aaKnown RBP10.71□□□□□ -0.69
HIPK1-206ENST00000369559 CELF1Q92879 486 aaKnown RBP10.71□□□□□ -0.69
HIPK1-206ENST00000369559 GBP5Q96PP8 586 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 TRAIPQ9BWF2 469 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 CHORDC1Q9UHD1 332 aaPredicted RBP10.71□□□□□ -0.69
HIPK1-206ENST00000369559 DNM3Q9UQ16 869 aa10.71□□□□□ -0.69
HIPK1-206ENST00000369559 MEIS1O00470 390 aa10.71□□□□□ -0.7
HIPK1-206ENST00000369559 SLC34A1Q06495 639 aa10.71□□□□□ -0.7
HIPK1-206ENST00000369559 PTK6Q13882 451 aa10.71□□□□□ -0.7
HIPK1-206ENST00000369559 ASPRV1Q53RT3 343 aa10.71□□□□□ -0.7
HIPK1-206ENST00000369559 DSTYKQ6XUX3 929 aa10.71□□□□□ -0.7
HIPK1-206ENST00000369559 SYDE1Q6ZW31 735 aaPredicted RBP10.71□□□□□ -0.7
HIPK1-206ENST00000369559 ATL2Q8NHH9 583 aa10.71□□□□□ -0.7
HIPK1-206ENST00000369559 DENND1AQ8TEH3 1009 aa10.71□□□□□ -0.7
HIPK1-206ENST00000369559 MAML1Q92585 1016 aa10.71□□□□□ -0.7
HIPK1-206ENST00000369559 PTPRN2Q92932 1015 aa10.71□□□□□ -0.7
HIPK1-206ENST00000369559 CADM1Q9BY67 442 aaKnown RBP10.71□□□□□ -0.7
HIPK1-206ENST00000369559 UBN1Q9NPG3 1134 aa10.71□□□□□ -0.7
HIPK1-206ENST00000369559 CCDC87Q9NVE4 849 aa10.71□□□□□ -0.7
HIPK1-206ENST00000369559 ANAPC5Q9UJX4 755 aa10.71□□□□□ -0.7
HIPK1-206ENST00000369559 DDX60LQ5H9U9 1706 aaKnown RBP10.7□□□□□ -0.7
HIPK1-206ENST00000369559 NHSQ6T4R5 1651 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 FAM196BA6NMK8 535 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 PDLIM1O00151 329 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 CAPN9O14815 690 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 CLDN3O15551 220 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 PRPF4O43172 522 aaKnown RBP eCLIP10.7□□□□□ -0.7
HIPK1-206ENST00000369559 LDHBP07195 334 aaKnown RBP10.7□□□□□ -0.7
HIPK1-206ENST00000369559 ATF2P15336 505 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 SERPINB4P48594 390 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 NR1H3Q13133 447 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 NLRP9Q7RTR0 991 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 SDCCAG8Q86SQ7 713 aaPredicted RBP10.7□□□□□ -0.7
HIPK1-206ENST00000369559 TRABD2AQ86V40 505 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 CCNJLQ8IV13 435 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 PPFIBP2Q8ND30 876 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 PWWP2AQ96N64 755 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 RUSC1Q9BVN2 902 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 PNMA6FA0A0J9YX94 578 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 C2CD2LO14523 706 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 FSCN2O14926 492 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 SORBS3O60504 671 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 TBCAO75347 108 aaKnown RBP10.7□□□□□ -0.7
HIPK1-206ENST00000369559 KRT36O76013 467 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 GSTT1P30711 240 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 PSMC4P43686 418 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 TRIP13Q15645 432 aaPredicted RBP10.7□□□□□ -0.7
HIPK1-206ENST00000369559 CTC1Q2NKJ3 1217 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 ERFEQ4G0M1 354 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 RBM26Q5T8P6 1007 aaKnown RBP10.7□□□□□ -0.7
HIPK1-206ENST00000369559 PHLDB3Q6NSJ2 640 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 CLNKQ7Z7G1 428 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 CPNE8Q86YQ8 564 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 MKNK1Q9BUB5 465 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 ZMYM2Q9UBW7 1377 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 ATMINO43313 823 aaPredicted RBP10.7□□□□□ -0.7
HIPK1-206ENST00000369559 ONECUT3O60422 494 aaPredicted RBP10.7□□□□□ -0.7
HIPK1-206ENST00000369559 CCDC22O60826 627 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 PPP1R11O60927 126 aaPredicted RBP10.7□□□□□ -0.7
HIPK1-206ENST00000369559 GAS8O95995 478 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 RFX1P22670 979 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 MAN1A1P33908 653 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 NOVP48745 357 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 SLC18A1P54219 525 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 MYL7Q01449 175 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 AP1B1Q10567 949 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 KPNB1Q14974 876 aaKnown RBP10.7□□□□□ -0.7
HIPK1-206ENST00000369559 LLGL1Q15334 1064 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 ACSBG2Q5FVE4 666 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 PRUNE1Q86TP1 453 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 AZIN2Q96A70 460 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 PLVAPQ9BX97 442 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 UBE2OQ9C0C9 1292 aaKnown RBP10.7□□□□□ -0.7
HIPK1-206ENST00000369559 IKZF4Q9H2S9 585 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 CYLDQ9NQC7 956 aa10.7□□□□□ -0.7
HIPK1-206ENST00000369559 METTL5Q9NRN9 209 aaKnown RBP10.7□□□□□ -0.7
HIPK1-206ENST00000369559 LMCD1Q9NZU5 365 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms