RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 SPA17Q15506 151 aa18.17■□□□□ 0.5
PHGDH-202ENST00000369409 ASTE1Q2TB18 679 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-202ENST00000369409 ZACNQ401N2 412 aa18.17■□□□□ 0.5
PHGDH-202ENST00000369409 TDRD10Q5VZ19 366 aaKnown RBP18.17■□□□□ 0.5
PHGDH-202ENST00000369409 ELMO3Q96BJ8 720 aa18.17■□□□□ 0.5
PHGDH-202ENST00000369409 FAM212AQ96EL1 285 aa18.17■□□□□ 0.5
PHGDH-202ENST00000369409 OSMRQ99650 979 aa18.17■□□□□ 0.5
PHGDH-202ENST00000369409 HAUS4Q9H6D7 363 aa18.17■□□□□ 0.5
PHGDH-202ENST00000369409 TFR2Q9UP52 801 aa18.17■□□□□ 0.5
PHGDH-202ENST00000369409 RALGAPA2Q2PPJ7 1873 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 GNAT1P11488 350 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 FERP16591 822 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 ARHGAP25P42331 645 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 PIK3CAP42336 1068 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 ETF1P62495 437 aaKnown RBP18.16■□□□□ 0.5
PHGDH-202ENST00000369409 NKX3-2P78367 333 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 GFPT1Q06210 699 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-202ENST00000369409 PPM1KQ8N3J5 372 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 ERO1AQ96HE7 468 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 NT5C1BQ96P26 610 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 GCOM2Q9BZD3 368 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-202ENST00000369409 CDHR5Q9HBB8 845 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 EVI5O60447 810 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 LCA5LO95447 670 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 ABL1P00519 1130 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 C4BPAP04003 597 aaKnown RBP18.16■□□□□ 0.5
PHGDH-202ENST00000369409 PRKCIP41743 596 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 PTK2Q05397 1052 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 MAP3K21Q5TCX8 1036 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 OR5B17Q8NGF7 314 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 KAT5Q92993 513 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 PI4K2AQ9BTU6 479 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 IRX2Q9BZI1 471 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-202ENST00000369409 TRIM10Q9UDY6 481 aa18.16■□□□□ 0.5
PHGDH-202ENST00000369409 FKTNO75072 461 aa18.15■□□□□ 0.5
PHGDH-202ENST00000369409 HLA-DRAP01903 254 aa18.15■□□□□ 0.5
PHGDH-202ENST00000369409 MCF2P10911 925 aa18.15■□□□□ 0.5
PHGDH-202ENST00000369409 CDC42EP1Q00587 391 aa18.15■□□□□ 0.5
PHGDH-202ENST00000369409 NBPF20Q3BBV1 942 aa18.15■□□□□ 0.5
PHGDH-202ENST00000369409 ZNF571Q7Z3V5 609 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-202ENST00000369409 WDR49Q8IV35 697 aa18.15■□□□□ 0.5
PHGDH-202ENST00000369409 TMEM192Q8IY95 271 aa18.15■□□□□ 0.5
PHGDH-202ENST00000369409 ZNF296Q8WUU4 475 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-202ENST00000369409 JAKMIP2Q96AA8 810 aa18.15■□□□□ 0.5
PHGDH-202ENST00000369409 IFIH1Q9BYX4 1025 aaKnown RBP18.15■□□□□ 0.5
PHGDH-202ENST00000369409 DNAI1Q9UI46 699 aa18.15■□□□□ 0.5
PHGDH-202ENST00000369409 BZW2Q9Y6E2 419 aaKnown RBP18.15■□□□□ 0.5
PHGDH-202ENST00000369409 TRIP11Q15643 1979 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 RCCD1A6NED2 376 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 VNN1O95497 513 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 GNRH1P01148 92 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 ASGR1P07306 291 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 CXCL8P10145 99 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 VAV2P52735 878 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 GNG11P61952 73 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 FAM47CQ5HY64 1035 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 CATSPER4Q7RTX7 472 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 KIF18AQ8NI77 898 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 KREMEN1Q96MU8 473 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.14■□□□□ 0.49
PHGDH-202ENST00000369409 GTF2IRD1Q9UHL9 959 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 FANCGO15287 622 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 TUBB4AP04350 444 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 DARSP14868 501 aaKnown RBP18.14■□□□□ 0.49
PHGDH-202ENST00000369409 KCNA10Q16322 511 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 SLC18A3Q16572 532 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 KLHDC9Q8NEP7 349 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 HELQQ8TDG4 1101 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 PXYLP1Q8TE99 480 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 MTMR12Q9C0I1 747 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 RPF1Q9H9Y2 349 aaKnown RBP18.14■□□□□ 0.49
PHGDH-202ENST00000369409 C1orf112Q9NSG2 853 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 DDX20Q9UHI6 824 aaKnown RBP18.14■□□□□ 0.49
PHGDH-202ENST00000369409 PCDHA13Q9Y5I0 950 aa18.14■□□□□ 0.49
PHGDH-202ENST00000369409 A0A087X0T9 212 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 RBAK-RBAKDNI3L0D1 243 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 FOXN3O00409 490 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-202ENST00000369409 KIF5CO60282 957 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 FAM228BP0C875 321 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 STAG3L1P0CL83 205 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 CST5P28325 142 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-202ENST00000369409 MFAP3P55082 362 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 SURF1Q15526 300 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 CCDC122Q5T0U0 273 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 GDF6Q6KF10 455 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-202ENST00000369409 FMNL3Q8IVF7 1028 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 TATDN2Q93075 761 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 VTI1AQ96AJ9 217 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 WDR24Q96S15 920 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 ADPGKQ9BRR6 497 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 LACRTQ9GZZ8 138 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 SAGE1Q9NXZ1 904 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 ADAMTS1Q9UHI8 967 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 GUCA1BQ9UMX6 200 aa18.13■□□□□ 0.49
PHGDH-202ENST00000369409 A0A1B0GUA9 196 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 ZC3H11AO75152 810 aaKnown RBP eCLIP18.12■□□□□ 0.49
PHGDH-202ENST00000369409 PHACTR2O75167 634 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 CLSTN1O94985 981 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 AP3M2P53677 418 aa18.12■□□□□ 0.49
PHGDH-202ENST00000369409 SNX17Q15036 470 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms