RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 CYP4X1Q8N118 509 aa13.44□□□□□ -0.26
LINC01561-201ENST00000369071 PPM1KQ8N3J5 372 aa13.44□□□□□ -0.26
LINC01561-201ENST00000369071 DDX1Q92499 740 aaKnown RBP13.44□□□□□ -0.26
LINC01561-201ENST00000369071 KLHL29Q96CT2 875 aa13.44□□□□□ -0.26
LINC01561-201ENST00000369071 RSRC1Q96IZ7 334 aaKnown RBP13.44□□□□□ -0.26
LINC01561-201ENST00000369071 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC01561-201ENST00000369071 LARSQ9P2J5 1176 aaKnown RBP13.44□□□□□ -0.26
LINC01561-201ENST00000369071 LGALS13Q9UHV8 139 aa13.44□□□□□ -0.26
LINC01561-201ENST00000369071 THSD7AQ9UPZ6 1657 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 LOXHD1Q8IVV2 1947 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 GRIN3BO60391 1043 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 ADRB2P07550 413 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 CETPP11597 493 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 BRAFP15056 766 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 MKRN3Q13064 507 aaKnown RBP13.43□□□□□ -0.26
LINC01561-201ENST00000369071 TRAF1Q13077 416 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 RBM26Q5T8P6 1007 aaKnown RBP13.43□□□□□ -0.26
LINC01561-201ENST00000369071 ACAD10Q6JQN1 1059 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 GDAP1Q8TB36 358 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 HELQQ8TDG4 1101 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 PRCCQ92733 491 aaPredicted RBP13.43□□□□□ -0.26
LINC01561-201ENST00000369071 NGLY1Q96IV0 654 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 C8orf37Q96NL8 207 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 HERPUD2Q9BSE4 406 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 PLVAPQ9BX97 442 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 NINJ2Q9NZG7 142 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 ADGRA3Q8IWK6 1321 aa13.43□□□□□ -0.26
LINC01561-201ENST00000369071 A8MUI8 341 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 IPO5O00410 1097 aaKnown RBP13.42□□□□□ -0.26
LINC01561-201ENST00000369071 SORBS3O60504 671 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 CCND1P24385 295 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 PDE6BP35913 854 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 GTF2BQ00403 316 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 MAP2K1Q02750 393 aaPredicted RBP13.42□□□□□ -0.26
LINC01561-201ENST00000369071 CAV1Q03135 178 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 MGAT5Q09328 741 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 RNF43Q68DV7 783 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 KIF2BQ8N4N8 673 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 ATG4AQ8WYN0 398 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 THOC1Q96FV9 657 aaKnown RBP13.42□□□□□ -0.26
LINC01561-201ENST00000369071 RMDN2Q96LZ7 410 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 MAGEB18Q96M61 343 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 TGS1Q96RS0 853 aaKnown RBP13.42□□□□□ -0.26
LINC01561-201ENST00000369071 RIT2Q99578 217 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 DCLK3Q9C098 648 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 DNAJC17Q9NVM6 304 aaKnown RBP13.42□□□□□ -0.26
LINC01561-201ENST00000369071 NOP53Q9NZM5 478 aaKnown RBP13.42□□□□□ -0.26
LINC01561-201ENST00000369071 SYNPO2Q9UMS6 1093 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 G3V3G9 751 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 PLS3P13797 630 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 CCNB1P14635 433 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 MAN1A1P33908 653 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 RBM5P52756 815 aaKnown RBP eCLIP13.42□□□□□ -0.26
LINC01561-201ENST00000369071 TRIP13Q15645 432 aaPredicted RBP13.42□□□□□ -0.26
LINC01561-201ENST00000369071 DCAF8Q5TAQ9 597 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 CCDC174Q6PII3 467 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 ANKLE1Q8NAG6 615 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 MAIP1Q8WWC4 291 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 IFT74Q96LB3 600 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 TRAIPQ9BWF2 469 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 EHMT1Q9H9B1 1298 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 NEU2Q9Y3R4 380 aa13.42□□□□□ -0.26
LINC01561-201ENST00000369071 ZNF536O15090 1300 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 THAP12O43422 761 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 ECE1P42892 770 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 MSH2P43246 934 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 SNRPFP62306 86 aaKnown RBP13.41□□□□□ -0.26
LINC01561-201ENST00000369071 ACVR2BQ13705 512 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 MTFR1Q15390 333 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 ZKSCAN8Q15776 578 aaPredicted RBP13.41□□□□□ -0.26
LINC01561-201ENST00000369071 CLEC16AQ2KHT3 1053 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 HAUS6Q7Z4H7 955 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 KIRREL3Q8IZU9 778 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 GRK7Q8WTQ7 553 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 FAM212AQ96EL1 285 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 PWWP2AQ96N64 755 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 RANBP17Q9H2T7 1088 aaKnown RBP13.41□□□□□ -0.26
LINC01561-201ENST00000369071 ST6GALNAC4Q9H4F1 302 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 DBNDD1Q9H9R9 158 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 EURLQ9NYK6 297 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 ANAPC5Q9UJX4 755 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 TRIM33Q9UPN9 1127 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 NAALADL1Q9UQQ1 740 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 COQ4Q9Y3A0 265 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 ZNFX1Q9P2E3 1918 aaKnown RBP13.41□□□□□ -0.26
LINC01561-201ENST00000369071 ANKRD31Q8N7Z5 1873 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 GOLGA8IPA6NC78 632 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 GOLGA8JA6NMD2 632 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 DDX39AO00148 427 aaKnown RBP13.41□□□□□ -0.26
LINC01561-201ENST00000369071 ATF2P15336 505 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 TAC1P20366 129 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 MAPK4P31152 587 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 STX2P32856 288 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 SKIV2L2P42285 1042 aaKnown RBP13.41□□□□□ -0.26
LINC01561-201ENST00000369071 GPC3P51654 580 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 CCDC15Q0P6D6 951 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 NAA25Q14CX7 972 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 TMEM63BQ5T3F8 832 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 ARHGEF18Q6ZSZ5 1173 aa13.41□□□□□ -0.26
LINC01561-201ENST00000369071 MIER3Q7Z3K6 550 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms