RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 SCOCQ9UIL1 159 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 HAO1Q9UJM8 370 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 ZMYM2Q9UBW7 1377 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 FSCN2O14926 492 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 PRPF4O43172 522 aaKnown RBP eCLIP11.23□□□□□ -0.615e-6■□□□□ 8.5
LYSMD1-201ENST00000368908 ASMTLO95671 621 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 T-ENOLP0DO92 83 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 PYGMP11217 842 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 TARSP26639 723 aaKnown RBP11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 RPA1P27694 616 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 PPP1R15BQ5SWA1 713 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 MAEAQ7L5Y9 396 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 SLC17A8Q8NDX2 589 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 GRK7Q8WTQ7 553 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 C10orf82Q8WW14 230 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 GORASP1Q9BQQ3 440 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 CCDC28BQ9BUN5 200 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 TIPINQ9BVW5 301 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 PLVAPQ9BX97 442 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 DNAJC18Q9H819 358 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 PHTF1Q9UMS5 762 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 DNM3Q9UQ16 869 aa11.23□□□□□ -0.61
LYSMD1-201ENST00000368908 TBX3O15119 743 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 TGFB1I1O43294 461 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 THAP12O43422 761 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 EDF1O60869 148 aaKnown RBP11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 RNF8O76064 485 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 SKIP12755 728 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 IVDP26440 423 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 MARK3P27448 753 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 CHKAP35790 457 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 WDR4P57081 412 aaKnown RBP11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 CUL3Q13618 768 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 ERFEQ4G0M1 354 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 SLC45A4Q5BKX6 768 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 TPTE2Q6XPS3 522 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 NBPF5PQ86XG9 351 aaPredicted RBP11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 PALB2Q86YC2 1186 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 LRRC8CQ8TDW0 803 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 CELF1Q92879 486 aaKnown RBP11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 NLRP3Q96P20 1036 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 DENND2DQ9H6A0 471 aaPredicted RBP11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 NMRK1Q9NWW6 199 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 DLGAP2Q9P1A6 1054 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 NAALADL1Q9UQQ1 740 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 PTPN22Q9Y2R2 807 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 PCDHB13Q9Y5F0 798 aa11.22□□□□□ -0.61
LYSMD1-201ENST00000368908 TCRBV7S2A1N4TA0A589 114 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 MAP3K13O43283 966 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 TBCAO75347 108 aaKnown RBP11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 FTLP02792 175 aaPredicted RBP11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 EPHB2P29323 1055 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 MYL7Q01449 175 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 SPIRE1Q08AE8 756 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 SNX1Q13596 522 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 SLC10A5Q5PT55 438 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 PRR5LQ6MZQ0 368 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 SDCCAG8Q86SQ7 713 aaPredicted RBP11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 SRRM1Q8IYB3 904 aaKnown RBP11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 CYP4X1Q8N118 509 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 BBOF1Q8ND07 529 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 SUPT20HQ8NEM7 779 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 DENND1AQ8TEH3 1009 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 GJA10Q969M2 543 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 TRAIPQ9BWF2 469 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 FOXP3Q9BZS1 431 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 SEPT11Q9NVA2 429 aaKnown RBP11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 FRMPD2Q68DX3 1309 aaPredicted RBP11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 CLIC2O15247 247 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 GCNT3O95395 438 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 BCRP11274 1271 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 GZMAP12544 262 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 RFC5P40937 340 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 TGFB2P61812 414 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 RNASELQ05823 741 aaKnown RBP11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 SPARCL1Q14515 664 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 PDK4Q16654 411 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 KYNUQ16719 465 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 CATSPER3Q86XQ3 398 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 TDRPQ86YL5 185 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 MAPKAPK5Q8IW41 473 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 TTC8Q8TAM2 541 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 MAML1Q92585 1016 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 TUBB6Q9BUF5 446 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 JMJD4Q9H9V9 463 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 PIDD1Q9HB75 910 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 SENP1Q9P0U3 644 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 PDP2Q9P2J9 529 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 ASIC3Q9UHC3 531 aa11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 SAP30BPQ9UHR5 308 aaKnown RBP11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 SMG5Q9UPR3 1016 aaKnown RBP11.21□□□□□ -0.61
LYSMD1-201ENST00000368908 MAGEA13PA6NCF6 341 aa11.2□□□□□ -0.62
LYSMD1-201ENST00000368908 TMEM110-MUSTN1A8MSY1 372 aa11.2□□□□□ -0.62
LYSMD1-201ENST00000368908 C2CD2LO14523 706 aa11.2□□□□□ -0.62
LYSMD1-201ENST00000368908 PPP1R11O60927 126 aaPredicted RBP11.2□□□□□ -0.62
LYSMD1-201ENST00000368908 GAS8O95995 478 aa11.2□□□□□ -0.62
LYSMD1-201ENST00000368908 CETPP11597 493 aa11.2□□□□□ -0.62
LYSMD1-201ENST00000368908 KCNJ1P48048 391 aa11.2□□□□□ -0.62
LYSMD1-201ENST00000368908 ITGA8P53708 1063 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms