RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 CENPIQ92674 756 aaPredicted RBP10.71□□□□□ -0.69
SCNM1-202ENST00000368905 UPF1Q92900 1129 aaKnown RBP eCLIP10.71□□□□□ -0.69
SCNM1-202ENST00000368905 MS4A4AQ96JQ5 239 aa10.71□□□□□ -0.69
SCNM1-202ENST00000368905 UBXN10Q96LJ8 280 aa10.71□□□□□ -0.69
SCNM1-202ENST00000368905 NT5C1BQ96P26 610 aa10.71□□□□□ -0.69
SCNM1-202ENST00000368905 B3GNT4Q9C0J1 378 aa10.71□□□□□ -0.69
SCNM1-202ENST00000368905 STMN4Q9H169 189 aaPredicted RBP10.71□□□□□ -0.69
SCNM1-202ENST00000368905 TRPV6Q9H1D0 765 aa10.71□□□□□ -0.69
SCNM1-202ENST00000368905 MMADHCQ9H3L0 296 aaPredicted RBP10.71□□□□□ -0.69
SCNM1-202ENST00000368905 DNAJC18Q9H819 358 aa10.71□□□□□ -0.69
SCNM1-202ENST00000368905 CYP4F12Q9HCS2 524 aa10.71□□□□□ -0.69
SCNM1-202ENST00000368905 POLMQ9NP87 494 aaPredicted RBP10.71□□□□□ -0.69
SCNM1-202ENST00000368905 VPS45Q9NRW7 570 aa10.71□□□□□ -0.69
SCNM1-202ENST00000368905 IMPACTQ9P2X3 320 aa10.71□□□□□ -0.69
SCNM1-202ENST00000368905 SRP68Q9UHB9 627 aaKnown RBP10.71□□□□□ -0.69
SCNM1-202ENST00000368905 MYH2Q9UKX2 1941 aa10.71□□□□□ -0.7
SCNM1-202ENST00000368905 DUOX1Q9NRD9 1551 aa10.71□□□□□ -0.7
SCNM1-202ENST00000368905 UQCRHLA0A096LP55 91 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 UQCRHP07919 91 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 ATP5F1P24539 256 aaPredicted RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 ARFIP1P53367 373 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 GRIK3Q13003 919 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 GRAPQ13588 217 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 SHQ1Q6PI26 577 aaKnown RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 PPM1NQ8N819 430 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 CNNM3Q8NE01 707 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 SUPT20HQ8NEM7 779 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 GOT1L1Q8NHS2 421 aaPredicted RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 GRAPLQ8TC17 118 aaPredicted RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 SPON2Q9BUD6 331 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 KCNF1Q9H3M0 494 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 DACH1Q9UI36 760 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 TUBE1Q9UJT0 475 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 KCNH3Q9ULD8 1083 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 MAPK8IP1Q9UQF2 711 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 RGPD3A6NKT7 1758 aaPredicted RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 RGPD4Q7Z3J3 1758 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 TAF1P21675 1872 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 LY75O60449 1722 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 BTBD18B2RXH4 712 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 SIN3BO75182 1162 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 BAG3O95817 575 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 APBA3O96018 575 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 MYCP01106 439 aaPredicted RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 PECAM1P16284 738 aaPredicted RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 HDCP19113 662 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 ENDOUP21128 410 aaKnown RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 KRT9P35527 623 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 KRT2P35908 639 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 TGFB2P61812 414 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 DYNLL1P63167 89 aaKnown RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 BASP1P80723 227 aaKnown RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 PTPN21Q16825 1174 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 TLDC1Q6P9B6 456 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 SHC4Q6S5L8 630 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 ILDR2Q71H61 639 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 ZNF804AQ7Z570 1209 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 TMCO5AQ8N6Q1 288 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 CNBD1Q8NA66 436 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 PCSK9Q8NBP7 692 aaKnown RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 SCG3Q8WXD2 468 aaKnown RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 FERMT2Q96AC1 680 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 VPS39Q96JC1 886 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 CITED4Q96RK1 184 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 IRX2Q9BZI1 471 aaPredicted RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 ANLNQ9NQW6 1124 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 SAP30BPQ9UHR5 308 aaKnown RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 PCDHGB5Q9Y5G0 923 aa10.7□□□□□ -0.7
SCNM1-202ENST00000368905 BAZ2AQ9UIF9 1905 aaKnown RBP10.7□□□□□ -0.7
SCNM1-202ENST00000368905 XDHP47989 1333 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 DLEC1Q9Y238 1755 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 B4E171 279 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 SMAD7O15105 426 aaKnown RBP10.69□□□□□ -0.7
SCNM1-202ENST00000368905 MTSS1O43312 755 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 NPR3P17342 541 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 PTPREP23469 700 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 RPIAP49247 311 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 TKTL1P51854 596 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 NRLP54845 237 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 ACY1Q03154 408 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 STK11Q15831 433 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 ZNF423Q2M1K9 1284 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 CEP55Q53EZ4 464 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 SLC30A6Q6NXT4 461 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 EPM2AIP1Q7L775 607 aaPredicted RBP10.69□□□□□ -0.7
SCNM1-202ENST00000368905 SMYD1Q8NB12 490 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 SMARCAD1Q9H4L7 1026 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 ZNF287Q9HBT7 754 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 DCP1AQ9NPI6 582 aaPredicted RBP10.69□□□□□ -0.7
SCNM1-202ENST00000368905 C19orf53Q9UNZ5 99 aaPredicted RBP10.69□□□□□ -0.7
SCNM1-202ENST00000368905 JAG2Q9Y219 1238 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.69□□□□□ -0.7
SCNM1-202ENST00000368905 TAF1LQ8IZX4 1826 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 MROH7-TTC4A0A0A0MT08 1334 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 LAMB1P07942 1786 aa10.69□□□□□ -0.7
SCNM1-202ENST00000368905 TRIM75PA6NK02 468 aa10.68□□□□□ -0.7
SCNM1-202ENST00000368905 ABLIM1O14639 778 aa10.68□□□□□ -0.7
SCNM1-202ENST00000368905 MAFKO60675 156 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms