RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TMEM206Q9H813 350 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 B4GALT5O43286 388 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 DKC1O60832 514 aaKnown RBP eCLIP11.47□□□□□ -0.57
TPM3-212ENST00000368533 LGALS2P05162 132 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 INSRRP14616 1297 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 VAMP7P51809 220 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 NLRP11P59045 1033 aaKnown RBP11.47□□□□□ -0.57
TPM3-212ENST00000368533 EFCAB12Q6NXP0 572 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 ZNF662Q6ZS27 426 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 BORCS6Q96GS4 357 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 HAPLN2Q9GZV7 340 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 FAM49AQ9H0Q0 323 aaPredicted RBP11.47□□□□□ -0.57
TPM3-212ENST00000368533 PDLIM7Q9NR12 457 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 MCM8Q9UJA3 840 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 PLXNB2O15031 1838 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 TARSL2A2RTX5 802 aaKnown RBP11.47□□□□□ -0.57
TPM3-212ENST00000368533 ZBTB42B2RXF5 422 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 PALMO75781 387 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 HNRNPH3P31942 346 aaKnown RBP11.47□□□□□ -0.57
TPM3-212ENST00000368533 SSTR3P32745 418 aaPredicted RBP11.47□□□□□ -0.57
TPM3-212ENST00000368533 FNTAP49354 379 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 CCNHP51946 323 aaPredicted RBP11.47□□□□□ -0.57
TPM3-212ENST00000368533 INHBEP58166 350 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 STRN3Q13033 797 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 ACVR2BQ13705 512 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 ASIC2Q16515 512 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 MAMDC4Q6UXC1 1216 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 IFNL1Q8IU54 200 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 SH2D3CQ8N5H7 860 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 OR6J1Q8NGC5 347 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 DMAC2Q9NW81 257 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 CEP72Q9P209 647 aa11.47□□□□□ -0.57
TPM3-212ENST00000368533 IGKV6D-21A0A0A0MT36 114 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 EME2A4GXA9 379 aaPredicted RBP11.46□□□□□ -0.57
TPM3-212ENST00000368533 TNPO2O14787 897 aaKnown RBP11.46□□□□□ -0.57
TPM3-212ENST00000368533 MYCP01106 439 aaPredicted RBP11.46□□□□□ -0.57
TPM3-212ENST00000368533 SERPING1P05155 500 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 PEX19P40855 299 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 GRB14Q14449 540 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 KCTD19Q17RG1 926 aaPredicted RBP11.46□□□□□ -0.57
TPM3-212ENST00000368533 KLHDC7AQ5VTJ3 777 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 MAP4K3Q8IVH8 894 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 ZC3H3Q8IXZ2 948 aaKnown RBP11.46□□□□□ -0.57
TPM3-212ENST00000368533 SHCBP1Q8NEM2 672 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 PACSIN1Q9BY11 444 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 GANQ9H2C0 597 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 METTL14Q9HCE5 456 aaKnown RBP11.46□□□□□ -0.57
TPM3-212ENST00000368533 SUCLA2Q9P2R7 463 aaPredicted RBP11.46□□□□□ -0.57
TPM3-212ENST00000368533 FAM184BQ9ULE4 1060 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 AKT3Q9Y243 479 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 GRIN2DO15399 1336 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 PLXNA1Q9UIW2 1896 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 TNFSF9P41273 254 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 MARSP56192 900 aaKnown RBP11.46□□□□□ -0.57
TPM3-212ENST00000368533 LAMTOR4Q0VGL1 99 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 ARHGEF19Q8IW93 802 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 KCTD17Q8N5Z5 321 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 CEP120Q8N960 986 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 MINDY3Q9H8M7 445 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 MORF4L1Q9UBU8 362 aa11.46□□□□□ -0.57
TPM3-212ENST00000368533 CHORDC1Q9UHD1 332 aaPredicted RBP11.46□□□□□ -0.57
TPM3-212ENST00000368533 ESYT3A0FGR9 886 aa11.46□□□□□ -0.58
TPM3-212ENST00000368533 KLRC1P26715 233 aa11.46□□□□□ -0.58
TPM3-212ENST00000368533 CDC25CP30307 473 aa11.46□□□□□ -0.58
TPM3-212ENST00000368533 CFAP221Q4G0U5 840 aa11.46□□□□□ -0.58
TPM3-212ENST00000368533 C1orf220Q5T0J3 134 aa11.46□□□□□ -0.58
TPM3-212ENST00000368533 THNSL1Q8IYQ7 743 aa11.46□□□□□ -0.58
TPM3-212ENST00000368533 ATP8B4Q8TF62 1192 aa11.46□□□□□ -0.58
TPM3-212ENST00000368533 TAF4BQ92750 862 aa11.46□□□□□ -0.58
TPM3-212ENST00000368533 INTS2Q9H0H0 1204 aaKnown RBP11.46□□□□□ -0.58
TPM3-212ENST00000368533 SIX2Q9NPC8 291 aa11.46□□□□□ -0.58
TPM3-212ENST00000368533 RBM12Q9NTZ6 932 aaKnown RBP11.46□□□□□ -0.58
TPM3-212ENST00000368533 SETD4Q9NVD3 440 aa11.46□□□□□ -0.58
TPM3-212ENST00000368533 A0A087X0T9 212 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 EIF3HO15372 352 aaKnown RBP eCLIP11.45□□□□□ -0.58
TPM3-212ENST00000368533 SLC16A3O15427 465 aaKnown RBP11.45□□□□□ -0.58
TPM3-212ENST00000368533 ATP2C2O75185 946 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 KIAA0754O94854 1291 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 GH1P01241 217 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 FAM228BP0C875 321 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 TNNI1P19237 187 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 COPB2P35606 906 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 CLNS1AP54105 237 aaKnown RBP11.45□□□□□ -0.58
TPM3-212ENST00000368533 CAP1Q01518 475 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 OLFML2BQ68BL8 750 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 SPOPLQ6IQ16 392 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 PHLDB3Q6NSJ2 640 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 PPM1KQ8N3J5 372 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 SEMA4DQ92854 862 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 TLR10Q9BXR5 811 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 GOLPH3Q9H4A6 298 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 UBE2TQ9NPD8 197 aaPredicted RBP11.45□□□□□ -0.58
TPM3-212ENST00000368533 DNAJC12Q9UKB3 198 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 ARID2Q68CP9 1835 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 H3BRB1 525 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 STRNO43815 780 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 SARNPP82979 210 aaKnown RBP11.45□□□□□ -0.58
TPM3-212ENST00000368533 TNFAIP2Q03169 654 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 PTK2Q05397 1052 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 TRIM32Q13049 653 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms