RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 DEXIO95424 95 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 BMP3P12645 472 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 AKR1A1P14550 325 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 PDE6AP16499 860 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 SFPQP23246 707 aaKnown RBP eCLIP7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 ERCC5P28715 1186 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 NDUFA8P51970 172 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 ANTXR2P58335 489 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 MYL5Q02045 173 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 TUBB2AQ13885 445 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 MPP2Q14168 576 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 ZNF792Q3KQV3 632 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 NT5DC1Q5TFE4 455 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 RESP18Q5W5W9 173 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 RPAINQ86UA6 219 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 RPUSD2Q8IZ73 545 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 CCAR2Q8N163 923 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 MLKLQ8NB16 471 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 SPATA5Q8NB90 893 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 KCT2Q8NC54 265 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 MRPL38Q96DV4 380 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 RIPOR3Q96MK2 946 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 TUBB2BQ9BVA1 445 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 LRRC2Q9BYS8 371 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 NAPBQ9H115 298 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 UPF3AQ9H1J1 476 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 GOLPH3LQ9H4A5 285 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 RBM28Q9NW13 759 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 CLDND1Q9NY35 253 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 NAP1L2Q9ULW6 460 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 ACTL7BQ9Y614 415 aa7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 MYO5AQ9Y4I1 1855 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-202ENST00000368289 FANCGO15287 622 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 ATP8B1O43520 1251 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 CILPO75339 1184 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 APPP05067 770 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 ITGB2P05107 769 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 CYP2C9P11712 490 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 PFKFB1P16118 471 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 VCAM1P19320 739 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 ADORA1P30542 326 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 GJA9P57773 515 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 NKX3-2P78367 333 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 CCZ1BP86790 482 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 CCZ1P86791 482 aaPredicted RBP7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 RBM10P98175 930 aaKnown RBP7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 BEX3Q00994 111 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 PTPN11Q06124 597 aaPredicted RBP7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 PDE4BQ07343 736 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 HYAL1Q12794 435 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 MAP7Q14244 749 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 PTPAQ15257 358 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 ZYXQ15942 572 aaKnown RBP7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 NTRK3Q16288 839 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 ZNF394Q53GI3 561 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 CCDC178Q5BJE1 867 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 FBXL19Q6PCT2 694 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 BNC2Q6ZN30 1099 aaPredicted RBP7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 C11orf57Q6ZUT1 292 aaPredicted RBP7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 VPS37DQ86XT2 251 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 CLEC10AQ8IUN9 316 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 IFNL3Q8IZI9 196 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 ACER1Q8TDN7 264 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 TGS1Q96RS0 853 aaKnown RBP7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 SPOCK3Q9BQ16 436 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 NT5C1AQ9BXI3 368 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 RNF26Q9BY78 433 aaPredicted RBP7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 SPATC1LQ9H0A9 340 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 SMOC2Q9H3U7 446 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 CCSER2Q9H7U1 834 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 AS3MTQ9HBK9 375 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 NCOA5Q9HCD5 579 aaKnown RBP7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 OGFRQ9NZT2 677 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 RAXQ9Y2V3 346 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 PHLPP2Q6ZVD8 1323 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 ZNF532Q9HCE3 1301 aa7.23□□□□□ -1.25
ECHDC1-202ENST00000368289 A0A1B0GVL5 298 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 FAM221AA4D161 298 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 GOLGA8AA7E2F4 631 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 IFIT3O14879 490 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 TLR3O15455 904 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 GREM1O60565 184 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 RNGTTO60942 597 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 DUSP11O75319 330 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 IDH1O75874 414 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 SMC2O95347 1197 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 SLU7O95391 586 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 EYA4O95677 639 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 MMP1P03956 469 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 H2AFB1P0C5Y9 115 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 H2AFB2P0C5Z0 115 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 C6orf222P0C671 652 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 GARTP22102 1010 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 TRAPPC10P48553 1259 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 WDR5P61964 334 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 PSMC6P62333 389 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 CEBPZQ03701 1054 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 WTAPQ15007 396 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 KIAA1755Q5JYT7 1200 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms