RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 GAB3Q8WWW8 586 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 JDP2Q8WYK2 163 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 RAX2Q96IS3 184 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 OSBPL6Q9BZF3 934 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 TRPM5Q9NZQ8 1165 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 PCDHB6Q9Y5E3 794 aa4.66□□□□□ -1.66
ECHDC1-201ENST00000368287 RNASET2O00584 256 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 PFKMP08237 780 aa4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 MTHFD2P13995 350 aa4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 ENPP1P22413 925 aa4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 NEK2P51955 445 aa4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 PTTG1IPP53801 180 aa4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 LRRC41Q15345 812 aa4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 PCBP2Q15366 365 aaKnown RBP eCLIP4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 CT83Q5H943 113 aa4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 AMOTL1Q8IY63 956 aa4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 OR14C36Q8NHC7 312 aa4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 LMBR1Q8WVP7 490 aa4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 EAF2Q96CJ1 260 aaPredicted RBP4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 CPPED1Q9BRF8 314 aaPredicted RBP4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 C14orf93Q9H972 538 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 DNAI1Q9UI46 699 aa4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 TLK1Q9UKI8 766 aa4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 PPP2R3BQ9Y5P8 575 aa4.65□□□□□ -1.67
ECHDC1-201ENST00000368287 PCDHGA12O60330 932 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 NCR1O76036 304 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 NDUFA10O95299 355 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 MYBL2P10244 700 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 APOBEC3AP31941 199 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 GPR3P46089 330 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 PPARAQ07869 468 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 KLF1Q13351 362 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 PTPN21Q16825 1174 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 FAM214AQ32MH5 1076 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 PITRM1Q5JRX3 1037 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 LMBR1LQ6UX01 489 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 C1orf162Q8NEQ5 155 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 CAGE1Q8TC20 777 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 FUBP3Q96I24 572 aaKnown RBP eCLIP4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 PAWRQ96IZ0 340 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 UIMC1Q96RL1 719 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 HAPLN2Q9GZV7 340 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 EPC1Q9H2F5 836 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 AKIP1Q9NQ31 210 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 PRSS50Q9UI38 385 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 EDARQ9UNE0 448 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 PCDHGA9Q9Y5G4 932 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 PCDHGA8Q9Y5G5 932 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 PCDHGA7Q9Y5G6 932 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 PCDHGA6Q9Y5G7 932 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 PCDHGA3Q9Y5H0 932 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 PCDHGA2Q9Y5H1 932 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 EID1Q9Y6B2 187 aa4.64□□□□□ -1.67
ECHDC1-201ENST00000368287 COL3A1P02461 1466 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 SHTN1A0MZ66 631 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 MARCH6O60337 910 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 RBMXL2O75526 392 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 CFBP00751 764 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 LPLP06858 475 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 HOXB6P17509 224 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 RAB27AP51159 221 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 LGALS4P56470 323 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 MRPS9P82933 396 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 ODF1Q14990 250 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 GDF7Q7Z4P5 450 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 GLB1L2Q8IW92 636 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 LILRA3Q8N6C8 439 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 ANKS1AQ92625 1134 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 TSR2Q969E8 191 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 HOOK2Q96ED9 719 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 NDC1Q9BTX1 674 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 RTFDC1Q9BY42 306 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 CCM2LQ9NUG4 571 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 DNAJC28Q9NX36 388 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 TMPRSS11EQ9UL52 423 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 ZBTB21Q9ULJ3 1066 aa4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 COL11A2P13942 1736 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-201ENST00000368287 GAGE12BA1L429 117 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 GAGE12HA6NDE8 117 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 AKAP10O43572 662 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 IGLV2-14P01704 120 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 HNRNPLP14866 589 aaKnown RBP eCLIP4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 KIR2DL3P43628 341 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 ZNF81P51508 661 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 SRSF2Q01130 221 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 GUCY1B3Q02153 619 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 TRIM25Q14258 630 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 VPS72Q15906 364 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 METTL24Q5JXM2 366 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 PGM2L1Q6PCE3 622 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 FAM180AQ6UWF9 173 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 LYSMD2Q8IV50 215 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 Q8N9P0 234 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 GLB1L3Q8NCI6 653 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 ZNF384Q8TF68 577 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 AUTS2Q8WXX7 1259 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 FAXDC2Q96IV6 333 aa4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 DCLRE1CQ96SD1 692 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-201ENST00000368287 QRSL1Q9H0R6 528 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms