RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 SCP2P22307 547 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 BPIFB4P59827 614 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 RPS6P62753 249 aaKnown RBP15.3■□□□□ 0.04
CD48-201ENST00000368045 QPCTQ16769 361 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 BRDTQ58F21 947 aaPredicted RBP15.3■□□□□ 0.04
CD48-201ENST00000368045 SWT1Q5T5J6 900 aaKnown RBP15.3■□□□□ 0.04
CD48-201ENST00000368045 TAOK1Q7L7X3 1001 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 CCDC13Q8IYE1 715 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 TTLL6Q8N841 843 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 MCPH1Q8NEM0 835 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 TAS1R2Q8TE23 839 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 GRK7Q8WTQ7 553 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 CCDC127Q96BQ5 260 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 RMDN3Q96TC7 470 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 SEMA4AQ9H3S1 761 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 AZI2Q9H6S1 392 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 LRRC4CQ9HCJ2 640 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 KCNG1Q9UIX4 513 aa15.3■□□□□ 0.04
CD48-201ENST00000368045 CTDP1Q9Y5B0 961 aaPredicted RBP15.3■□□□□ 0.04
CD48-201ENST00000368045 TCRBV7S2A1N4TA0A589 114 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 CHN1P15882 459 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 ITIH2P19823 946 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 CCND2P30279 289 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 CAV1Q03135 178 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 PTP4A2Q12974 167 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 PPP1R7Q15435 360 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 ZNF568Q3ZCX4 644 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 PLA2G4FQ68DD2 849 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 SV2AQ7L0J3 742 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.29■□□□□ 0.04
CD48-201ENST00000368045 NLRX1Q86UT6 975 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 CPXCR1Q8N123 301 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 GPD1LQ8N335 351 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 ATXN2LQ8WWM7 1075 aaKnown RBP15.29■□□□□ 0.04
CD48-201ENST00000368045 ATP6V0A1Q93050 837 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 ZNF317Q96PQ6 595 aaPredicted RBP15.29■□□□□ 0.04
CD48-201ENST00000368045 ADAM7Q9H2U9 754 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 KDM4CQ9H3R0 1056 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 HOMER3Q9NSC5 361 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 ZBTB12Q9Y330 459 aaPredicted RBP15.29■□□□□ 0.04
CD48-201ENST00000368045 PCDHA10Q9Y5I2 948 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 TMEM150BA6NC51 233 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 RASGRF2O14827 1237 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 MYCLP12524 364 aaPredicted RBP15.29■□□□□ 0.04
CD48-201ENST00000368045 MAPK4P31152 587 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 SGO2Q562F6 1265 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 ANKRD20A8PQ5CZ79 823 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 ARHGEF16Q5VV41 709 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 PPP1R2P3Q6NXS1 205 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 SLC39A4Q6P5W5 647 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 KCNV1Q6PIU1 500 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 ANO5Q75V66 913 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 POMGNT1Q8WZA1 660 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 SELENOSQ9BQE4 189 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 C1orf112Q9NSG2 853 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 CHORDC1Q9UHD1 332 aaPredicted RBP15.29■□□□□ 0.04
CD48-201ENST00000368045 ZNRF3Q9ULT6 936 aa15.29■□□□□ 0.04
CD48-201ENST00000368045 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.29■□□□□ 0.04
CD48-201ENST00000368045 TLDC2A0PJX2 215 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 ATP9AO75110 1047 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 ATP5DP30049 168 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 CENPCQ03188 943 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 PTK6Q13882 451 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 ITIH4Q14624 930 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 MCOLN2Q8IZK6 566 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 ANKS4BQ8N8V4 417 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 CCDC197Q8NCU1 140 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 MDM1Q8TC05 714 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 KCNN1Q92952 543 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 BTBD6Q96KE9 485 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 NSRP1Q9H0G5 558 aaKnown RBP15.28■□□□□ 0.04
CD48-201ENST00000368045 HOMER2Q9NSB8 354 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 INTS9Q9NV88 658 aaKnown RBP15.28■□□□□ 0.04
CD48-201ENST00000368045 ANAPC7Q9UJX3 599 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 PCDHB2Q9Y5E7 798 aa15.28■□□□□ 0.04
CD48-201ENST00000368045 CLDN3O15551 220 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 RASSF9O75901 435 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 DGAT1O75907 488 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 UNGP13051 313 aaPredicted RBP15.27■□□□□ 0.04
CD48-201ENST00000368045 KRT5P13647 590 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 GTF2A1P52655 376 aaPredicted RBP15.27■□□□□ 0.04
CD48-201ENST00000368045 CLDN10P78369 228 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 AUHQ13825 339 aaKnown RBP15.27■□□□□ 0.04
CD48-201ENST00000368045 TRIM72Q6ZMU5 477 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 C15orf39Q6ZRI6 1047 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 VSIG10LQ86VR7 867 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 NIM1KQ8IY84 436 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 BSNDQ8WZ55 320 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 SNF8Q96H20 258 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 CEP170P1Q96L14 293 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 CCDC114Q96M63 670 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 SERPINB12Q96P63 405 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 OSBPL7Q9BZF2 842 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 ACP6Q9NPH0 428 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 PDLIM7Q9NR12 457 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 TOPORSQ9NS56 1045 aaPredicted RBP15.27■□□□□ 0.04
CD48-201ENST00000368045 PTPN22Q9Y2R2 807 aa15.27■□□□□ 0.04
CD48-201ENST00000368045 FAM170AA1A519 330 aa15.26■□□□□ 0.03
CD48-201ENST00000368045 TESPA1A2RU30 521 aaPredicted RBP15.26■□□□□ 0.03
CD48-201ENST00000368045 GAS8O95995 478 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms