RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PPFIA2O75334 1257 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 FTCDO95954 541 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 FGBP02675 491 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 NUDT17P0C025 328 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 PDHBP11177 359 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 FERP16591 822 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 RDXP35241 583 aaKnown RBP12.42□□□□□ -0.42
USF1-201ENST00000368019 SLC16A2P36021 539 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 ALDH5A1P51649 535 aaPredicted RBP12.42□□□□□ -0.42
USF1-201ENST00000368019 MRPL12P52815 198 aaKnown RBP12.42□□□□□ -0.42
USF1-201ENST00000368019 DRG2P55039 364 aaKnown RBP12.42□□□□□ -0.42
USF1-201ENST00000368019 LMNB2Q03252 620 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 XRCC4Q13426 336 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 BAATQ14032 418 aaPredicted RBP12.42□□□□□ -0.42
USF1-201ENST00000368019 HLTFQ14527 1009 aaKnown RBP eCLIP12.42□□□□□ -0.42
USF1-201ENST00000368019 UAP1Q16222 522 aaPredicted RBP12.42□□□□□ -0.42
USF1-201ENST00000368019 DUSP28Q4G0W2 176 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 SYDE2Q5VT97 1194 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 KCTD16Q68DU8 428 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 IRF2BP2Q7Z5L9 587 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 TET1Q8NFU7 2136 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 CLEC4DQ8WXI8 215 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 HPS3Q969F9 1004 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 TLCD1Q96CP7 247 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 PSMB7Q99436 277 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 NAP1L3Q99457 506 aaPredicted RBP12.42□□□□□ -0.42
USF1-201ENST00000368019 TXLNGYQ9BZA5 131 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 WNT8AQ9H1J5 351 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 KDM4CQ9H3R0 1056 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 KLC4Q9NSK0 619 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 NAGPAQ9UK23 515 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 NOC2LQ9Y3T9 749 aaKnown RBP12.42□□□□□ -0.42
USF1-201ENST00000368019 LOXHD1Q8IVV2 1947 aa12.42□□□□□ -0.42
USF1-201ENST00000368019 CYP3A7-CYP3A51PA0A087WV96 503 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 POTEMA6NI47 508 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 E7EVH7 732 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 KCNK3O14649 394 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 TBX3O15119 743 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 SART1O43290 800 aaKnown RBP12.41□□□□□ -0.42
USF1-201ENST00000368019 CALUO43852 315 aaPredicted RBP12.41□□□□□ -0.42
USF1-201ENST00000368019 TDP2O95551 362 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 AFPP02771 609 aaKnown RBP12.41□□□□□ -0.42
USF1-201ENST00000368019 H2AFZP0C0S5 128 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 CCDC172P0C7W6 258 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 CYP3A7P24462 503 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 CTNNA1P35221 906 aaKnown RBP12.41□□□□□ -0.42
USF1-201ENST00000368019 GUCY2FP51841 1108 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 HADHBP55084 474 aaKnown RBP12.41□□□□□ -0.42
USF1-201ENST00000368019 PSMC6P62333 389 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 KCNH2Q12809 1159 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 ADGRE1Q14246 886 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 NEDD9Q14511 834 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 ITIH4Q14624 930 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 TCEAL1Q15170 157 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 H2AFVQ71UI9 128 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 TMC3Q7Z5M5 1100 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 CCDC13Q8IYE1 715 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 SLFN12Q8IYM2 578 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 CACNA2D3Q8IZS8 1091 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 METTL13Q8N6R0 699 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 CUL5Q93034 780 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 TATDN2Q93075 761 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 TMEM109Q9BVC6 243 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 PRDM12Q9H4Q4 367 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 CCDC134Q9H6E4 229 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 PRDM6Q9NQX0 595 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 DDX25Q9UHL0 483 aaKnown RBP12.41□□□□□ -0.42
USF1-201ENST00000368019 MTMR7Q9Y216 660 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 KIAA1217Q5T5P2 1943 aa12.41□□□□□ -0.42
USF1-201ENST00000368019 ZSCAN5CA6NGD5 496 aaPredicted RBP12.4□□□□□ -0.42
USF1-201ENST00000368019 PLA2G4BP0C869 781 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 CYP11B2P19099 503 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 RPL13P26373 211 aaKnown RBP12.4□□□□□ -0.42
USF1-201ENST00000368019 SLC8A1P32418 973 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 CCL23P55773 120 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 JAM2P57087 298 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 PURAQ00577 322 aaKnown RBP12.4□□□□□ -0.42
USF1-201ENST00000368019 POU5F1Q01860 360 aaKnown RBP12.4□□□□□ -0.42
USF1-201ENST00000368019 DHX34Q14147 1143 aaKnown RBP12.4□□□□□ -0.42
USF1-201ENST00000368019 RAB30Q15771 203 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 GPATCH4Q5T3I0 446 aaKnown RBP12.4□□□□□ -0.42
USF1-201ENST00000368019 ALKBH5Q6P6C2 394 aaKnown RBP12.4□□□□□ -0.42
USF1-201ENST00000368019 EPM2AIP1Q7L775 607 aaPredicted RBP12.4□□□□□ -0.42
USF1-201ENST00000368019 PEX26Q7Z412 305 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 KCNK18Q7Z418 384 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 SCFD1Q8WVM8 642 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 HAS1Q92839 578 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 PGM2Q96G03 612 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 EEF2KMTQ96G04 330 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 SGSM3Q96HU1 749 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 HES6Q96HZ4 224 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 SPAG5Q96R06 1193 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 GAS2L1Q99501 681 aaPredicted RBP12.4□□□□□ -0.42
USF1-201ENST00000368019 MKNK1Q9BUB5 465 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.4□□□□□ -0.42
USF1-201ENST00000368019 WDR11Q9BZH6 1224 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 CARD9Q9H257 536 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 TMEM260Q9NX78 707 aa12.4□□□□□ -0.42
USF1-201ENST00000368019 ARMCX3Q9UH62 379 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms