RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 RARGP13631 454 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 COPS2P61201 443 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 OSTNP61366 133 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 GPS1Q13098 491 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 SCARA5Q6ZMJ2 495 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 FMNL3Q8IVF7 1028 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 PARD3BQ8TEW8 1205 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 MCUR1Q96AQ8 359 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 CEP170P1Q96L14 293 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 SMC6Q96SB8 1091 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 KMT5AQ9NQR1 393 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 NAALADL1Q9UQQ1 740 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 SNX3O60493 162 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 VCAM1P19320 739 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 CPA2P48052 419 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 RCN2Q14257 317 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 BBS9Q3SYG4 887 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 THEMIS2Q5TEJ8 643 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 APOBEC3HQ6NTF7 200 aaKnown RBP11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 CYP4X1Q8N118 509 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 RMDN2Q96LZ7 410 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 LRRC37BQ96QE4 947 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 WNT8AQ9H1J5 351 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 ZWILCHQ9H900 591 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 RAVER2Q9HCJ3 691 aaKnown RBP11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 ARL2BPQ9Y2Y0 163 aa11.75□□□□□ -0.53
NECTIN4-201ENST00000368012 F5H423 210 aaPredicted RBP11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 O00370 1275 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 CBX6O95503 412 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 CLK2P49760 499 aaKnown RBP11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 DGKZQ13574 1117 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 SNRNP35Q16560 246 aaKnown RBP11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 C1orf186Q6ZWK4 172 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 DCAF4Q8WV16 495 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 GRHL1Q9NZI5 618 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 ADAM22Q9P0K1 906 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 SAE1Q9UBE0 346 aaPredicted RBP11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 ATF5Q9Y2D1 282 aaPredicted RBP11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 R3HDM2Q9Y2K5 976 aaKnown RBP11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 STXBP5LQ9Y2K9 1186 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 MAP3K6O95382 1288 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 IL1R1P14778 569 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 SREBF1P36956 1147 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 AOC3Q16853 763 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 ZDHHC14Q8IZN3 488 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 RASGEF1CQ8N431 466 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 NUDCD1Q96RS6 583 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 IQCGQ9H095 443 aaKnown RBP11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 ZBTB12Q9Y330 459 aaPredicted RBP11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 SPATA31A5Q5VU36 1347 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 SPATA31A7Q8IWB4 1347 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 LRRIQ4A6NIV6 560 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 PIK3R2O00459 728 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 BAG2O95816 211 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 KITP10721 976 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 CYP11B1P15538 503 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 GBP1P32455 592 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 MMP13P45452 471 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 MARSP56192 900 aaKnown RBP11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 PRKG1Q13976 671 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 PLCB4Q15147 1175 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 ANKRD35Q8N283 1001 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 FITM2Q8N6M3 262 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 TTC17Q96AE7 1141 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 SNF8Q96H20 258 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 CYTH2Q99418 400 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 UBN1Q9NPG3 1134 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 ZDHHC18Q9NUE0 388 aa11.74□□□□□ -0.53
NECTIN4-201ENST00000368012 A0A0A6YYK5 440 aaPredicted RBP11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 ATP2A1O14983 1001 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 KRT1P04264 644 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 ATP2A2P16615 1042 aaKnown RBP11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 HSPA6P17066 643 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 PIK3CAP42336 1068 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 JAM2P57087 298 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 GABPAQ06546 454 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 STRN3Q13033 797 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 SMTNL2Q2TAL5 461 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 CAPRIN2Q6IMN6 1127 aaKnown RBP11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 APBB1IPQ7Z5R6 666 aaPredicted RBP11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 LDHDQ86WU2 507 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 COL23A1Q86Y22 540 aaPredicted RBP11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 OGFOD1Q8N543 542 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 STRCQ7RTU9 1775 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 TLR3O15455 904 aaKnown RBP11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 HSPA1LP34931 641 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 LIG4P49917 911 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 ARSEP51690 589 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 PDIA2Q13087 525 aaKnown RBP11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 DMP1Q13316 513 aaPredicted RBP11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 MTERF2Q49AM1 385 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 BRDTQ58F21 947 aaPredicted RBP11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 LIN9Q5TKA1 542 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 PALM2Q8IXS6 379 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 EPS8L1Q8TE68 723 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 PRMT6Q96LA8 375 aaPredicted RBP11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 OSBPL1AQ9BXW6 950 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 KCNH7Q9NS40 1196 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 GINM1Q9NU53 330 aa11.73□□□□□ -0.53
NECTIN4-201ENST00000368012 PCSK1NQ9UHG2 260 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms