RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 PPFIBP1Q86W92 1011 aa10.32□□□□□ -0.76
VTA1-201ENST00000367621 SLC43A3Q8NBI5 491 aa10.32□□□□□ -0.76
VTA1-201ENST00000367621 PCSK9Q8NBP7 692 aaKnown RBP10.32□□□□□ -0.76
VTA1-201ENST00000367621 TMEM40Q8WWA1 233 aa10.32□□□□□ -0.76
VTA1-201ENST00000367621 NLRP7Q8WX94 980 aa10.32□□□□□ -0.76
VTA1-201ENST00000367621 FAM84AQ96KN4 292 aa10.32□□□□□ -0.76
VTA1-201ENST00000367621 PANX2Q96RD6 677 aa10.32□□□□□ -0.76
VTA1-201ENST00000367621 POP1Q99575 1024 aaKnown RBP10.32□□□□□ -0.76
VTA1-201ENST00000367621 MSTO1Q9BUK6 570 aa10.32□□□□□ -0.76
VTA1-201ENST00000367621 LSM14BQ9BX40 385 aaKnown RBP10.32□□□□□ -0.76
VTA1-201ENST00000367621 INO80BQ9C086 356 aaPredicted RBP10.32□□□□□ -0.76
VTA1-201ENST00000367621 UNC93B1Q9H1C4 597 aa10.32□□□□□ -0.76
VTA1-201ENST00000367621 PDZD7Q9H5P4 517 aa10.32□□□□□ -0.76
VTA1-201ENST00000367621 KIAA1586Q9HCI6 787 aa10.32□□□□□ -0.76
VTA1-201ENST00000367621 PLCB1Q9NQ66 1216 aa10.32□□□□□ -0.76
VTA1-201ENST00000367621 TOPORSQ9NS56 1045 aaPredicted RBP10.32□□□□□ -0.76
VTA1-201ENST00000367621 FAM207AQ9NSI2 230 aaPredicted RBP10.32□□□□□ -0.76
VTA1-201ENST00000367621 PRMT7Q9NVM4 692 aaPredicted RBP10.32□□□□□ -0.76
VTA1-201ENST00000367621 A0A1B0GUA9 196 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 ZNF233A6NK53 670 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 CLDN3O15551 220 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 LRRN2O75325 713 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 GNAT1P11488 350 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 SKILP12757 684 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 KRT13P13646 458 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 ARF4P18085 180 aaPredicted RBP10.31□□□□□ -0.76
VTA1-201ENST00000367621 FGFR4P22455 802 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 DNAJB2P25686 324 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 KRT9P35527 623 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 TNFSF9P41273 254 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 GCLMP48507 274 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 PSMD6Q15008 389 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 MTFR1Q15390 333 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 EXOC3L4Q17RC7 722 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 TRIM71Q2Q1W2 868 aaKnown RBP10.31□□□□□ -0.76
VTA1-201ENST00000367621 EPC2Q52LR7 807 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 SEZ6Q53EL9 994 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 KLHDC7AQ5VTJ3 777 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 TCERG1LQ5VWI1 586 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 E4F1Q66K89 784 aaPredicted RBP10.31□□□□□ -0.76
VTA1-201ENST00000367621 TAF2Q6P1X5 1199 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 C15orf39Q6ZRI6 1047 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 ZBTB33Q86T24 672 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 RNF180Q86T96 592 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 SERINC5Q86VE9 423 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 CDR2LQ86X02 465 aaPredicted RBP10.31□□□□□ -0.76
VTA1-201ENST00000367621 NME8Q8N427 588 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 KIAA1524Q8TCG1 905 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 CCDC51Q96ER9 411 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 PRIMPOLQ96LW4 560 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 TSEN34Q9BSV6 310 aaKnown RBP10.31□□□□□ -0.76
VTA1-201ENST00000367621 BEGAINQ9BUH8 593 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 NUP58Q9BVL2 599 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 NAA15Q9BXJ9 866 aaKnown RBP10.31□□□□□ -0.76
VTA1-201ENST00000367621 EDEM3Q9BZQ6 932 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 TMEM117Q9H0C3 514 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.31□□□□□ -0.76
VTA1-201ENST00000367621 CDT1Q9H211 546 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 MMRN2Q9H8L6 949 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 PAK6Q9NQU5 681 aaPredicted RBP10.31□□□□□ -0.76
VTA1-201ENST00000367621 ABHD10Q9NUJ1 306 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 ANKFY1Q9P2R3 1169 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 AJAP1Q9UKB5 411 aaPredicted RBP10.31□□□□□ -0.76
VTA1-201ENST00000367621 CPSF3Q9UKF6 684 aaKnown RBP10.31□□□□□ -0.76
VTA1-201ENST00000367621 PTPRJQ12913 1337 aa10.31□□□□□ -0.76
VTA1-201ENST00000367621 MOXD2PA6NHM9 499 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 ESPNB1AK53 854 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 OGTO15294 1046 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 P4HA2O15460 535 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 CABYRO75952 493 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 LDHAP00338 332 aaKnown RBP10.3□□□□□ -0.76
VTA1-201ENST00000367621 HNRNPH3P31942 346 aaKnown RBP10.3□□□□□ -0.76
VTA1-201ENST00000367621 GTF2H1P32780 548 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 CRYBB1P53674 252 aaPredicted RBP10.3□□□□□ -0.76
VTA1-201ENST00000367621 ZBED6P86452 979 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 MGAT3Q09327 533 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 ITGA7Q13683 1181 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 NOLC1Q14978 699 aaKnown RBP eCLIP10.3□□□□□ -0.76
VTA1-201ENST00000367621 SNX17Q15036 470 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 MEA1Q16626 185 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 SCARA3Q6AZY7 606 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 GBP6Q6ZN66 633 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 CNGA4Q8IV77 575 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 BRSK2Q8IWQ3 736 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 TMEM192Q8IY95 271 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 C17orf53Q8N3J3 647 aaPredicted RBP10.3□□□□□ -0.76
VTA1-201ENST00000367621 CEP120Q8N960 986 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 EHBP1Q8NDI1 1231 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 OR8K1Q8NGG5 319 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 DHX38Q92620 1227 aaKnown RBP10.3□□□□□ -0.76
VTA1-201ENST00000367621 SEMA4DQ92854 862 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 CCDC127Q96BQ5 260 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 IQCDQ96DY2 449 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 CPB2Q96IY4 423 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 OSMRQ99650 979 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 GCOM2Q9BZD3 368 aaPredicted RBP10.3□□□□□ -0.76
VTA1-201ENST00000367621 OSBPL7Q9BZF2 842 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 FAM117AQ9C073 453 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 INTS2Q9H0H0 1204 aaKnown RBP10.3□□□□□ -0.76
VTA1-201ENST00000367621 PDE11AQ9HCR9 933 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms