RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 TOM1L1O75674 476 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 BRD1O95696 1058 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 KLRC2P26717 231 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 CLCN4P51793 760 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 YARSP54577 528 aaKnown RBP11.35□□□□□ -0.59
YBX3-203ENST00000366286 CBX2Q14781 532 aaPredicted RBP11.35□□□□□ -0.59
YBX3-203ENST00000366286 STK38Q15208 465 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 RARS2Q5T160 578 aaKnown RBP11.35□□□□□ -0.59
YBX3-203ENST00000366286 KIAA0319Q5VV43 1072 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 HAUS6Q7Z4H7 955 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 PPFIBP1Q86W92 1011 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 MYCT1Q8N699 235 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 C12orf76Q8N812 135 aaPredicted RBP11.35□□□□□ -0.59
YBX3-203ENST00000366286 FEZF2Q8TBJ5 459 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 BICD1Q96G01 975 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 TCHPQ9BT92 498 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 PHF7Q9BWX1 381 aaPredicted RBP11.35□□□□□ -0.59
YBX3-203ENST00000366286 ZHX3Q9H4I2 956 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 PARVGQ9HBI0 331 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 GOLGA2P5Q9HBQ8 144 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 TOPORSQ9NS56 1045 aaPredicted RBP11.35□□□□□ -0.59
YBX3-203ENST00000366286 CCDC39Q9UFE4 941 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 KCNG1Q9UIX4 513 aa11.35□□□□□ -0.59
YBX3-203ENST00000366286 A0A087X0B3 334 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 SMIM28A0A1B0GU29 152 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 LOC730098B7Z3J9 87 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 PI4K2BG5E9Z4 385 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 TEX28O15482 410 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 MEFVO15553 781 aaPredicted RBP11.34□□□□□ -0.59
YBX3-203ENST00000366286 TADA2AO75478 443 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 ADH1AP07327 375 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 WEE2P0C1S8 567 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 DDIT3P35638 169 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 MATR3P43243 847 aaKnown RBP eCLIP11.34□□□□□ -0.59
YBX3-203ENST00000366286 ITIH3Q06033 890 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 SOX4Q06945 474 aaPredicted RBP11.34□□□□□ -0.59
YBX3-203ENST00000366286 MCL1Q07820 350 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 PKP1Q13835 747 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 USP41Q3LFD5 358 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 SEZ6Q53EL9 994 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 XKR4Q5GH76 650 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 RRAGBQ5VZM2 374 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 KIAA1841Q6NSI8 718 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 CES5AQ6NT32 575 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 KANK3Q6NY19 840 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 ALKAL1Q6UXT8 129 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 ZPBP2Q6X784 338 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 LINC00301Q8NCQ3 95 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 RIN2Q8WYP3 895 aaPredicted RBP11.34□□□□□ -0.59
YBX3-203ENST00000366286 KCNN1Q92952 543 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 FBXL18Q96ME1 805 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 ACAP3Q96P50 834 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 FIZ1Q96SL8 496 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 HAPLN2Q9GZV7 340 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 ADAM7Q9H2U9 754 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 POMKQ9H5K3 350 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 SFXN1Q9H9B4 322 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 CHST7Q9NS84 486 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 SSX2IPQ9Y2D8 614 aa11.34□□□□□ -0.59
YBX3-203ENST00000366286 FAM86C2PA6NEL3 165 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 TMEM189-UBE2V1I3L0A0 370 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 HNRNPDLO14979 420 aaKnown RBP11.33□□□□□ -0.6
YBX3-203ENST00000366286 SPTLC2O15270 562 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 TRAK2O60296 914 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 YEATS4O95619 227 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 F13A1P00488 732 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 ZSCAN22P10073 491 aaPredicted RBP11.33□□□□□ -0.6
YBX3-203ENST00000366286 SP100P23497 879 aaPredicted RBP11.33□□□□□ -0.6
YBX3-203ENST00000366286 IGFBP6P24592 240 aaPredicted RBP11.33□□□□□ -0.6
YBX3-203ENST00000366286 NMT1P30419 496 aaKnown RBP11.33□□□□□ -0.6
YBX3-203ENST00000366286 STAT6P42226 847 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 LIG4P49917 911 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 CLCNKBP51801 687 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 FOXD4L6Q3SYB3 417 aaPredicted RBP11.33□□□□□ -0.6
YBX3-203ENST00000366286 RTP2Q5QGT7 225 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 PRSS55Q6UWB4 352 aaPredicted RBP11.33□□□□□ -0.6
YBX3-203ENST00000366286 FOXD4L3Q6VB84 417 aaPredicted RBP11.33□□□□□ -0.6
YBX3-203ENST00000366286 CCDC73Q6ZRK6 1079 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 DYMQ7RTS9 669 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 SFR1Q86XK3 245 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 RNF135Q8IUD6 432 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 GLYCTKQ8IVS8 523 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 C3orf58Q8NDZ4 430 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 DDX12PQ92771 950 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 RPGRIP1Q96KN7 1286 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 UROC1Q96N76 676 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 ZNF396Q96N95 335 aaPredicted RBP11.33□□□□□ -0.6
YBX3-203ENST00000366286 ZMAT2Q96NC0 199 aaKnown RBP11.33□□□□□ -0.6
YBX3-203ENST00000366286 C1QTNF1Q9BXJ1 281 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 RXFP1Q9HBX9 757 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 C11orf16Q9NQ32 467 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 MAN1C1Q9NR34 630 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 CNTN3Q9P232 1028 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 TFIP11Q9UBB9 837 aaKnown RBP11.33□□□□□ -0.6
YBX3-203ENST00000366286 MUTYHQ9UIF7 546 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 TBX20Q9UMR3 447 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 DOCK6Q96HP0 2047 aa11.33□□□□□ -0.6
YBX3-203ENST00000366286 MYMKA6NI61 221 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms