RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 RAP2BP61225 183 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 ATP8B2P98198 1209 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 PTH1RQ03431 593 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 TARDBPQ13148 414 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 MTM1Q13496 603 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 UAP1L1Q3KQV9 507 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 FNDC7Q5VTL7 733 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 EFCAB12Q6NXP0 572 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 MIGA2Q7L4E1 593 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 ZBTB46Q86UZ6 589 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 CMTR2Q8IYT2 770 aaKnown RBP4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 CPT1CQ8TCG5 803 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 KAT5Q92993 513 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 HDAC10Q969S8 669 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 CYFIP2Q96F07 1278 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 ZNF341Q9BYN7 854 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 MANSC1Q9H8J5 431 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 TMEM140Q9NV12 185 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 MOCS1Q9NZB8 636 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 POGKQ9P215 609 aa4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 EIF2B4Q9UI10 523 aaKnown RBP4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 RUVBL1Q9Y265 456 aaKnown RBP4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 LUC7L2Q9Y383 392 aaKnown RBP4.27□□□□□ -1.73
RNU4-48P-201ENST00000365559 AHRRA9YTQ3 701 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 NPIPB8E9PQR5 432 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 SCAF4O95104 1147 aaKnown RBP4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 SNRPA1P09661 255 aaKnown RBP4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 C6P13671 934 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 DDCP20711 480 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 TACR2P21452 398 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 CHN2P52757 468 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 ZXDAP98168 799 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 NHLH2Q02577 135 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 LSM12Q3MHD2 195 aaKnown RBP4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 RRP12Q5JTH9 1297 aaKnown RBP4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 ATXN7L2Q5T6C5 722 aaPredicted RBP4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 METRNLQ641Q3 311 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 OTUD7BQ6GQQ9 843 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 CPA6Q8N4T0 437 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 ZFP28Q8NHY6 868 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 CASKIN2Q8WXE0 1202 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 HOOK2Q96ED9 719 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 NEU1Q99519 415 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 TEX101Q9BY14 249 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 ZNF768Q9H5H4 540 aaKnown RBP4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 SLC2A4RGQ9NR83 387 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 AASDHPPTQ9NRN7 309 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 TDP1Q9NUW8 608 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 CLCA2Q9UQC9 943 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 CHST2Q9Y4C5 530 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 PCDHB1Q9Y5F3 818 aa4.26□□□□□ -1.73
RNU4-48P-201ENST00000365559 DRGXA6NNA5 263 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 TRIM24O15164 1050 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 ZNF185O15231 689 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 NARSO43776 548 aaKnown RBP4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 ATP5JP18859 108 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 NR4A1P22736 598 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 ZFP36P26651 326 aaKnown RBP4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 RNASE9P60153 205 aaKnown RBP4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 FAM189BP81408 668 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 MCL1Q07820 350 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 TUBA3CQ13748 450 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 TTF1Q15361 905 aaPredicted RBP4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 TMEM240Q5SV17 173 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 ZNF529Q6P280 563 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 TUBA3EQ6PEY2 450 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 UBE3BQ7Z3V4 1068 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 DCBLD1Q8N8Z6 715 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 TMX3Q96JJ7 454 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 PHACTR3Q96KR7 559 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 CEP89Q96ST8 783 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 FBXO34Q9NWN3 711 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 GPRC5BQ9NZH0 403 aa4.25□□□□□ -1.73
RNU4-48P-201ENST00000365559 TCRBV7S2A1N4TA0A589 114 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 RPS6KA4O75676 772 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 RECQL4O94761 1208 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 PRSS23O95084 383 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 ZSCAN20P17040 1043 aaPredicted RBP4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 SLC6A2P23975 617 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 MGAT1P26572 445 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 FXR1P51114 621 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 ZNF280AP59817 542 aaPredicted RBP4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 CDC42EP1Q00587 391 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 UBXN2BQ14CS0 331 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 PDCD4Q53EL6 469 aaKnown RBP4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 FAM102AQ5T9C2 384 aaPredicted RBP4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 SEM1Q6ZVN7 128 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 MED25Q71SY5 747 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 GDF7Q7Z4P5 450 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 RSPH3Q86UC2 560 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 PLXDC1Q8IUK5 500 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 MIER2Q8N344 545 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 ZNF276Q8N554 614 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 IFI44Q8TCB0 444 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 SLC25A43Q8WUT9 341 aaPredicted RBP4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 DMRTA2Q96SC8 542 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 TRPM5Q9NZQ8 1165 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 IP6K2Q9UHH9 426 aa4.24□□□□□ -1.73
RNU4-48P-201ENST00000365559 THRAP3Q9Y2W1 955 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms