RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 VSIG10L2P0DP72 767 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 SLC5A1P13866 664 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 HSPA6P17066 643 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 RHCEP18577 417 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 PCSK1P29120 753 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 CRHR1P34998 444 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 HK3P52790 923 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 SLC16A1P53985 500 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 NKX6-1P78426 367 aaPredicted RBP3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 CDC42EP1Q00587 391 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 RHDQ02161 417 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 MTM1Q13496 603 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 CSRP2Q16527 193 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 PGS1Q32NB8 556 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 UAP1L1Q3KQV9 507 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 LSM12Q3MHD2 195 aaKnown RBP3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 ZNF568Q3ZCX4 644 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 LMBR1LQ6UX01 489 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 GPR135Q8IZ08 494 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 ZNF480Q8WV37 535 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 EXTL1Q92935 676 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 KAT5Q92993 513 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 PDCD2LQ9BRP1 358 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 SLC6A15Q9H2J7 730 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 C14orf93Q9H972 538 aaKnown RBP3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 ATP6V0A4Q9HBG4 840 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 MSL2Q9HCI7 577 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 PRDM11Q9NQV5 511 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 TLR9Q9NR96 1032 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 C1orf112Q9NSG2 853 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 INTUQ9ULD6 942 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 L1RE1Q9UN81 338 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 SLC30A1Q9Y6M5 507 aa3.13□□□□□ -1.91
RNU4-56P-201ENST00000364700 PCSK5Q92824 1860 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 A0A087X1B8 175 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 A0A088AWK7 358 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 GOLGA6CA6NDK9 693 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 GOLGA6BA6NDN3 693 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 LRRC14BA6NHZ5 514 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 TPP1O14773 563 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 PLSCR1O15162 318 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 PHF2O75151 1096 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 GOLGA6DP0CG33 693 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 ALOX15P16050 662 aaPredicted RBP3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 FPR1P21462 350 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 XPAP23025 273 aaPredicted RBP3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 NANOS3P60323 173 aaKnown RBP3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 RAC3P60763 192 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 ATP2C1P98194 919 aaPredicted RBP3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 TLE1Q04724 770 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 MFSD14BQ5SR56 506 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 GJC2Q5T442 439 aaPredicted RBP3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 Q6ZSN1 163 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 USP30Q70CQ3 517 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 ZNF572Q7Z3I7 529 aaPredicted RBP3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 POLNQ7Z5Q5 900 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 DENND1CQ8IV53 801 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 CCDC146Q8IYE0 955 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 FUKQ8N0W3 1084 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 REPS2Q8NFH8 660 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 CACTINQ8WUQ7 758 aaKnown RBP3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 RABGGTAQ92696 567 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 HDAC10Q969S8 669 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 CEP95Q96GE4 821 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 FAM89AQ96GI7 184 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 LRGUKQ96M69 825 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 CGRRF1Q99675 332 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 ADI1Q9BV57 179 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 ZNF700Q9H0M5 742 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 GOLGA6AQ9NYA3 693 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 GPRC5DQ9NZD1 345 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 PCDHA13Q9Y5I0 950 aa3.12□□□□□ -1.91
RNU4-56P-201ENST00000364700 PRSS29PA6NIE9 313 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 AKR1B10O60218 316 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 CAND2O75155 1236 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 PPFIA2O75334 1257 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 ITGA10O75578 1167 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 ENDOD1O94919 500 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 GASTP01350 101 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 JUNP05412 331 aaKnown RBP3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 CT47B1P0C2W7 299 aaPredicted RBP3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 MYBP10242 640 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 CR2P20023 1033 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 ACO1P21399 889 aaKnown RBP3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 ECHS1P30084 290 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 ADSLP30566 484 aaPredicted RBP3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 IL12RB1P42701 662 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 RRADP55042 308 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 NOGQ13253 232 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 SNAPC2Q13487 334 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 SEMA5AQ13591 1074 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 UBE4AQ14139 1066 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 NOMO1Q15155 1222 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 ZMAT1Q5H9K5 638 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 PRAMEF14Q5SWL7 426 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 MAMDC4Q6UXC1 1216 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 GPRIN1Q7Z2K8 1008 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 SRGAP1Q7Z6B7 1085 aa3.11□□□□□ -1.91
RNU4-56P-201ENST00000364700 FAM90A1Q86YD7 464 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms