RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 NEU1Q99519 415 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 APBA2Q99767 749 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 PYGO2Q9BRQ0 406 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 KBTBD4Q9NVX7 518 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 BIN2Q9UBW5 565 aaPredicted RBP0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 PCDHB6Q9Y5E3 794 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 NPFFR2Q9Y5X5 522 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 SMIM22K7EJ46 135 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 C4BPAP04003 597 aaKnown RBP0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 MMEP08473 750 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 CASRP41180 1078 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 GZMKP49863 264 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 VAV2P52735 878 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 ANTXR2P58335 489 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 KEAP1Q14145 624 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 TCEA2Q15560 299 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 METRNLQ641Q3 311 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 COLCA1Q6ZS62 124 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 RHOT2Q8IXI1 618 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 CUL5Q93034 780 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 DYDC2Q96IM9 177 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 C5orf34Q96MH7 638 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 GPR27Q9NS67 375 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 KLHL11Q9NVR0 708 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 SH3BP4Q9P0V3 963 aa0.75□□□□□ -2.29
RNU6-228P-201ENST00000362700 PRR23AA6NEV1 266 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 SYT5O00445 386 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 NHLRC4P0CG21 123 aaPredicted RBP0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 ZNF16P17020 682 aaPredicted RBP0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 GJA8P48165 433 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 SF3B3Q15393 1217 aaKnown RBP0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 FCN2Q15485 313 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 CCDC6Q16204 474 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 C10orf25Q5T742 122 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 ZDHHC20Q5W0Z9 365 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 DENND5AQ6IQ26 1287 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 IFNL3Q8IZI9 196 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 RNF169Q8NCN4 708 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 TFAP2CQ92754 450 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 FERD3LQ96RJ6 166 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 SPRY4Q9C004 299 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 SENP6Q9GZR1 1112 aaPredicted RBP0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 GFRA4Q9GZZ7 299 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 POLR3BQ9NW08 1133 aaPredicted RBP0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 DNAI1Q9UI46 699 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 ZNF318Q5VUA4 2279 aa0.74□□□□□ -2.29
RNU6-228P-201ENST00000362700 WDR17Q8IZU2 1322 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 IGKV6D-21A0A0A0MT36 114 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 A0A1B0GTW7 788 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 FAM83GA6ND36 823 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 SRRM3A6NNA2 597 aaPredicted RBP0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 ADAMTS3O15072 1205 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 MSCO60682 206 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 TULP3O75386 442 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 PRPF40AO75400 957 aaKnown RBP0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 JTBO76095 146 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 HNRNPLP14866 589 aaKnown RBP eCLIP0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 CYP2A13Q16696 494 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 FIGNQ5HY92 759 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 FBXW10Q5XX13 1052 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 TSHZ3Q63HK5 1081 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 VWA1Q6PCB0 445 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 SPATA2LQ8IUW3 424 aaPredicted RBP0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 PPP1R14CQ8TAE6 165 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 KLHL6Q8WZ60 621 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 NACC2Q96BF6 587 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 ZC3H10Q96K80 434 aaKnown RBP0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 PHACTR3Q96KR7 559 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 UIMC1Q96RL1 719 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 ZSWIM1Q9BR11 485 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 KCNE5Q9UJ90 142 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 NFS1Q9Y697 457 aa0.73□□□□□ -2.29
RNU6-228P-201ENST00000362700 TRGV11A0A075B6L2 103 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 TCRBV5S4A2TA0A5A2 114 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 B5MCH6 92 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 ADM5C9JUS6 153 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 FAM47E-STBD1D6RA91 191 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 TTLL1O95922 423 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 P4HBP07237 508 aaKnown RBP0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 DRD4P21917 467 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 ATP5F1P24539 256 aaPredicted RBP0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 ME1P48163 572 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 CHN2P52757 468 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 CEP85Q6P2H3 762 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 CAMKK1Q8N5S9 505 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 TMEM145Q8NBT3 493 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 ASB15Q8WXK1 588 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 GBP4Q96PP9 640 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 FAM118BQ9BPY3 351 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 LGR4Q9BXB1 951 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 REXO4Q9GZR2 422 aaKnown RBP0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 RNPEPQ9H4A4 650 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 INTS7Q9NVH2 962 aaKnown RBP0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 ING3Q9NXR8 418 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 KLHL13Q9P2N7 655 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 ASB1Q9Y576 335 aa0.72□□□□□ -2.29
RNU6-228P-201ENST00000362700 CARNS1A5YM72 827 aa0.71□□□□□ -2.3
RNU6-228P-201ENST00000362700 ERN1O75460 977 aaKnown RBP0.71□□□□□ -2.3
RNU6-228P-201ENST00000362700 SP1P08047 785 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms