RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 MKNK1Q9BUB5 465 aa11.7□□□□□ -0.54
SNX6-201ENST00000362031 HTATIP2Q9BUP3 242 aa11.7□□□□□ -0.54
SNX6-201ENST00000362031 TRIM6Q9C030 488 aaPredicted RBP11.7□□□□□ -0.54
SNX6-201ENST00000362031 ARMCX3Q9UH62 379 aaPredicted RBP11.7□□□□□ -0.54
SNX6-201ENST00000362031 LIMA1Q9UHB6 759 aaKnown RBP11.7□□□□□ -0.54
SNX6-201ENST00000362031 MICAL3Q7RTP6 2002 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 TTC26A0AVF1 554 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 ZNF623O75123 536 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 NFICP08651 508 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 CLTAP09496 248 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 DLATP10515 647 aaKnown RBP11.69□□□□□ -0.54
SNX6-201ENST00000362031 EPB41P11171 864 aaKnown RBP11.69□□□□□ -0.54
SNX6-201ENST00000362031 FGFR1P11362 822 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 CDK11BP21127 795 aaKnown RBP11.69□□□□□ -0.54
SNX6-201ENST00000362031 IGFBP6P24592 240 aaPredicted RBP11.69□□□□□ -0.54
SNX6-201ENST00000362031 GUCY2FP51841 1108 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 MCCD1P59942 119 aaPredicted RBP11.69□□□□□ -0.54
SNX6-201ENST00000362031 FANCCQ00597 558 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 BFSP1Q12934 665 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 CBWD6Q4V339 395 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 DCAF17Q5H9S7 520 aaPredicted RBP11.69□□□□□ -0.54
SNX6-201ENST00000362031 CBWD3Q5JTY5 395 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 GLRA4Q5JXX5 417 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 CBWD5Q5RIA9 395 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 SLC24A5Q71RS6 500 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 OTOP2Q7RTS6 562 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 TMEM199Q8N511 208 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 MMRN2Q9H8L6 949 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 GRPEL1Q9HAV7 217 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 CXXC1Q9P0U4 656 aaPredicted RBP11.69□□□□□ -0.54
SNX6-201ENST00000362031 CACNG4Q9UBN1 327 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 PARP2Q9UGN5 583 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 CITO14578 2027 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 GOLGA6L3A6NEY3 463 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 PTGESO14684 152 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 EEF1GP26641 437 aaKnown RBP11.69□□□□□ -0.54
SNX6-201ENST00000362031 MTIF2P46199 727 aaKnown RBP11.69□□□□□ -0.54
SNX6-201ENST00000362031 GCLMP48507 274 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 VAMP7P51809 220 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 COPB1P53618 953 aaKnown RBP11.69□□□□□ -0.54
SNX6-201ENST00000362031 DEFB103AP81534 67 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 PLCB2Q00722 1185 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 APBA1Q02410 837 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 PSMD6Q15008 389 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 CLLU1OSQ5K130 101 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 ZNF365Q70YC5 407 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 SNX27Q96L92 541 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 ACAP3Q96P50 834 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 GAD1Q99259 594 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 IL23AQ9NPF7 189 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 PRKAG2Q9UGJ0 569 aa11.69□□□□□ -0.54
SNX6-201ENST00000362031 MAPK13O15264 365 aa11.68□□□□□ -0.54
SNX6-201ENST00000362031 B4GALT3O60512 393 aa11.68□□□□□ -0.54
SNX6-201ENST00000362031 LDHAP00338 332 aaKnown RBP11.68□□□□□ -0.54
SNX6-201ENST00000362031 RFC2P35250 354 aa11.68□□□□□ -0.54
SNX6-201ENST00000362031 MLH1P40692 756 aa11.68□□□□□ -0.54
SNX6-201ENST00000362031 CLDN10P78369 228 aa11.68□□□□□ -0.54
SNX6-201ENST00000362031 KCNH2Q12809 1159 aa11.68□□□□□ -0.54
SNX6-201ENST00000362031 TCERG1LQ5VWI1 586 aa11.68□□□□□ -0.54
SNX6-201ENST00000362031 JADE1Q6IE81 842 aa11.68□□□□□ -0.54
SNX6-201ENST00000362031 CNKSR3Q6P9H4 555 aa11.68□□□□□ -0.54
SNX6-201ENST00000362031 C18orf25Q96B23 403 aaPredicted RBP11.68□□□□□ -0.54
SNX6-201ENST00000362031 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.68□□□□□ -0.546e-7■■□□□ 14
SNX6-201ENST00000362031 FTHL17Q9BXU8 183 aa11.68□□□□□ -0.54
SNX6-201ENST00000362031 RPF1Q9H9Y2 349 aaKnown RBP11.68□□□□□ -0.54
SNX6-201ENST00000362031 IFNKQ9P0W0 207 aa11.68□□□□□ -0.54
SNX6-201ENST00000362031 HCSTQ9UBK5 93 aa11.68□□□□□ -0.54
SNX6-201ENST00000362031 ARL5CA6NH57 179 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 KIAA0391O15091 583 aaKnown RBP11.67□□□□□ -0.54
SNX6-201ENST00000362031 PARNO95453 639 aaKnown RBP11.67□□□□□ -0.54
SNX6-201ENST00000362031 GNA14O95837 355 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 ITGA4P13612 1032 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 KLK7P49862 253 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 FPGSQ05932 587 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 SOX4Q06945 474 aaPredicted RBP11.67□□□□□ -0.54
SNX6-201ENST00000362031 TMEM240Q5SV17 173 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 INTS8Q75QN2 995 aaKnown RBP11.67□□□□□ -0.54
SNX6-201ENST00000362031 APBB2Q92870 758 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 CRACR2AQ9BSW2 395 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 CCDC94Q9BW85 323 aaPredicted RBP11.67□□□□□ -0.54
SNX6-201ENST00000362031 XPO4Q9C0E2 1151 aaKnown RBP11.67□□□□□ -0.54
SNX6-201ENST00000362031 TMEM117Q9H0C3 514 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 KIAA1586Q9HCI6 787 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.67□□□□□ -0.542e-9■■■■■ 223.6
SNX6-201ENST00000362031 MAGEC2Q9UBF1 373 aaPredicted RBP11.67□□□□□ -0.54
SNX6-201ENST00000362031 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.67□□□□□ -0.54
SNX6-201ENST00000362031 PTPRSQ13332 1948 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 A0A1B0GTH6 734 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 SMIM28A0A1B0GU29 152 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 OFD1O75665 1012 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 FGFR1OPO95684 399 aaKnown RBP11.67□□□□□ -0.54
SNX6-201ENST00000362031 WDR5P61964 334 aaKnown RBP11.67□□□□□ -0.54
SNX6-201ENST00000362031 IKBKEQ14164 716 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 NR1I3Q14994 352 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 NAB2Q15742 525 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 VWA3BQ502W6 1294 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 XKR4Q5GH76 650 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 CXorf38Q8TB03 319 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 HELQQ8TDG4 1101 aa11.67□□□□□ -0.54
SNX6-201ENST00000362031 RABGGTAQ92696 567 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms