RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CLEC11AQ9Y240 323 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 SCINQ9Y6U3 715 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 ANXA13P27216 316 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 EPHA7Q15375 998 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 DCLK2Q8N568 766 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 RNF34Q969K3 372 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 FAM149B1Q96BN6 582 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 GRAMD1AQ96CP6 724 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 RBM41Q96IZ5 413 aaKnown RBP14.75□□□□□ -0.05
COL6A1-201ENST00000361866 RIOX1Q9H6W3 641 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 CTNNAL1Q9UBT7 734 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 FIS1Q9Y3D6 152 aa14.75□□□□□ -0.05
COL6A1-201ENST00000361866 STK10O94804 968 aaKnown RBP14.74□□□□□ -0.05
COL6A1-201ENST00000361866 PYGMP11217 842 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 NOP14P78316 857 aaKnown RBP14.74□□□□□ -0.05
COL6A1-201ENST00000361866 NPY5RQ15761 445 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 HIF1AQ16665 826 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 EP400NLQ6ZTU2 488 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 PCGF5Q86SE9 256 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 CCNYQ8ND76 341 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 GJD4Q96KN9 370 aaPredicted RBP14.74□□□□□ -0.05
COL6A1-201ENST00000361866 PAGR1Q9BTK6 254 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 PRR12Q9ULL5 1215 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 PFDN1O60925 122 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 KRT10P13645 584 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 MARK3P27448 753 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 LVRNQ6Q4G3 990 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 ZBTB8OSQ8IWT0 167 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 CDAN1Q8IWY9 1227 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 DHX38Q92620 1227 aaKnown RBP14.74□□□□□ -0.05
COL6A1-201ENST00000361866 KIF9Q9HAQ2 790 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 GABBR1Q9UBS5 961 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 NR1H3Q13133 447 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.74□□□□□ -0.05
COL6A1-201ENST00000361866 TMEM154Q6P9G4 183 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 CBWD2Q8IUF1 395 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 MAP7D3Q8IWC1 876 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 SLC5A5Q92911 643 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 ZBTB10Q96DT7 871 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 DDX27Q96GQ7 796 aaKnown RBP14.74□□□□□ -0.05
COL6A1-201ENST00000361866 SCYL1Q96KG9 808 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 KDM4CQ9H3R0 1056 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 UVRAGQ9P2Y5 699 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 ZBED1O96006 694 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 ENO1P06733 434 aaKnown RBP14.74□□□□□ -0.05
COL6A1-201ENST00000361866 KLC1Q07866 573 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 ALCAMQ13740 583 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 SWSAP1Q6NVH7 229 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 SLC47A2Q86VL8 602 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 LDHDQ86WU2 507 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 TMEM35BQ8NCS4 154 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 AGR3Q8TD06 166 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 TATDN2Q93075 761 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 TMEM237Q96Q45 408 aa14.74□□□□□ -0.05
COL6A1-201ENST00000361866 RTFDC1Q9BY42 306 aaPredicted RBP14.74□□□□□ -0.05
COL6A1-201ENST00000361866 ROPN1BQ9BZX4 212 aaPredicted RBP14.74□□□□□ -0.05
COL6A1-201ENST00000361866 ROPN1Q9HAT0 212 aaPredicted RBP14.74□□□□□ -0.05
COL6A1-201ENST00000361866 PIK3R2O00459 728 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 KRT37O76014 449 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 PGM1P36871 562 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 MARCKSL1P49006 195 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 MKRN3Q13064 507 aaKnown RBP14.73□□□□□ -0.05
COL6A1-201ENST00000361866 SH2D4BQ5SQS7 431 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 CRLF3Q8IUI8 442 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 DNAJC19Q96DA6 116 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 MTMR9Q96QG7 549 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 BATF3Q9NR55 127 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 hCG_2014768A0A024R1R8 64 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 RASSF10A6NK89 507 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 HNRNPH3P31942 346 aaKnown RBP14.73□□□□□ -0.05
COL6A1-201ENST00000361866 KCNJ2P63252 427 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 PDE1CQ14123 709 aaPredicted RBP14.73□□□□□ -0.05
COL6A1-201ENST00000361866 ECM1Q16610 540 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 SMTNL2Q2TAL5 461 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 TMCO4Q5TGY1 634 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 PRR5LQ6MZQ0 368 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 SLC9A2Q9UBY0 812 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 SPECC1L-ADORA2AF8WAN1 911 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 H0YCG3 227 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 NKRFO15226 690 aaKnown RBP eCLIP14.73□□□□□ -0.05
COL6A1-201ENST00000361866 YWHABP31946 246 aaKnown RBP14.73□□□□□ -0.05
COL6A1-201ENST00000361866 MORC4Q8TE76 937 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 KAT5Q92993 513 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 ABTB1Q969K4 478 aaPredicted RBP14.73□□□□□ -0.05
COL6A1-201ENST00000361866 TTC25Q96NG3 672 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 ANGPTL2Q9UKU9 493 aa14.73□□□□□ -0.05
COL6A1-201ENST00000361866 TISP43B9A030 160 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 RFX1P22670 979 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 ALDH5A1P51649 535 aaPredicted RBP14.72□□□□□ -0.05
COL6A1-201ENST00000361866 TPD52P55327 224 aaPredicted RBP14.72□□□□□ -0.05
COL6A1-201ENST00000361866 CBWD6Q4V339 395 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 CBWD3Q5JTY5 395 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 CBWD5Q5RIA9 395 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 TRIM50Q86XT4 487 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 DNAJC9Q8WXX5 260 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 UBXN6Q9BZV1 441 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 TUFT1Q9NNX1 390 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 FBXO28Q9NVF7 368 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 PHTF1Q9UMS5 762 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 SLC4A7Q9Y6M7 1214 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms