RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CTTNBP2NLQ9P2B4 639 aa24.3■■□□□ 1.48
LDB1-201ENST00000361198 CHORDC1Q9UHD1 332 aaPredicted RBP24.3■■□□□ 1.48
LDB1-201ENST00000361198 AGO2Q9UKV8 859 aaKnown RBP24.3■■□□□ 1.48
LDB1-201ENST00000361198 TGFB3P10600 412 aa24.29■■□□□ 1.48
LDB1-201ENST00000361198 GZMAP12544 262 aa24.29■■□□□ 1.48
LDB1-201ENST00000361198 HADHBP55084 474 aaKnown RBP24.29■■□□□ 1.48
LDB1-201ENST00000361198 GPC5P78333 572 aa24.29■■□□□ 1.48
LDB1-201ENST00000361198 DCAF12L1Q5VU92 463 aa24.29■■□□□ 1.48
LDB1-201ENST00000361198 KDM7AQ6ZMT4 941 aa24.29■■□□□ 1.48
LDB1-201ENST00000361198 CDCA5Q96FF9 252 aa24.29■■□□□ 1.48
LDB1-201ENST00000361198 KIAA1586Q9HCI6 787 aa24.29■■□□□ 1.48
LDB1-201ENST00000361198 NRBP2Q9NSY0 501 aa24.29■■□□□ 1.48
LDB1-201ENST00000361198 CCDC188H7C350 402 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 EDN1P05305 212 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 CLDN10P78369 228 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 TTLL12Q14166 644 aaPredicted RBP24.28■■□□□ 1.48
LDB1-201ENST00000361198 Q3C1V9 767 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 METTL7BQ6UX53 244 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 CRELD2Q6UXH1 353 aaPredicted RBP24.28■■□□□ 1.48
LDB1-201ENST00000361198 SEPT1Q8WYJ6 367 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 FAM107BQ9H098 131 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 AGTPBP1Q9UPW5 1226 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 ZNFX1Q9P2E3 1918 aaKnown RBP24.28■■□□□ 1.48
LDB1-201ENST00000361198 KRIT1O00522 736 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 ARIH2O95376 493 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 PIGRP01833 764 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 ITGA4P13612 1032 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 CCT5P48643 541 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 PSMD6Q15008 389 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 FGD4Q96M96 766 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 TARS2Q9BW92 718 aaKnown RBP24.28■■□□□ 1.48
LDB1-201ENST00000361198 RBPJLQ9UBG7 517 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 ALG6Q9Y672 507 aa24.28■■□□□ 1.48
LDB1-201ENST00000361198 LRRC37A2A6NM11 1700 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 EBAG9O00559 213 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 SART1O43290 800 aaKnown RBP24.27■■□□□ 1.48
LDB1-201ENST00000361198 RFC5P40937 340 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 PDE6CP51160 858 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 DRP2Q13474 957 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 SH2D3CQ8N5H7 860 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 FNBP1Q96RU3 617 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 DDX47Q9H0S4 455 aaKnown RBP24.27■■□□□ 1.48
LDB1-201ENST00000361198 KCNH4Q9UQ05 1017 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 SIP14410 1827 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 SOCS7O14512 581 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 ATMINO43313 823 aaPredicted RBP24.27■■□□□ 1.48
LDB1-201ENST00000361198 TNNI1P19237 187 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 GCNT1Q02742 428 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 TCEAL1Q15170 157 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 FAM160B1Q5W0V3 765 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 KCTD16Q68DU8 428 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 EFCAB13Q8IY85 973 aa24.27■■□□□ 1.48
LDB1-201ENST00000361198 DDX1Q92499 740 aaKnown RBP24.27■■□□□ 1.48
LDB1-201ENST00000361198 PTPRJQ12913 1337 aa24.26■■□□□ 1.47
LDB1-201ENST00000361198 ZEB2O60315 1214 aa24.26■■□□□ 1.47
LDB1-201ENST00000361198 SLC25A27O95847 323 aa24.26■■□□□ 1.47
LDB1-201ENST00000361198 CDR2Q01850 454 aa24.26■■□□□ 1.47
LDB1-201ENST00000361198 MOGSQ13724 837 aa24.26■■□□□ 1.47
LDB1-201ENST00000361198 CAPSQ13938 189 aa24.26■■□□□ 1.47
LDB1-201ENST00000361198 ZBTB41Q5SVQ8 909 aa24.26■■□□□ 1.47
LDB1-201ENST00000361198 C9orf131Q5VYM1 1079 aa24.26■■□□□ 1.47
LDB1-201ENST00000361198 ANKFY1Q9P2R3 1169 aa24.26■■□□□ 1.47
LDB1-201ENST00000361198 FGGP02679 453 aa24.26■■□□□ 1.47
LDB1-201ENST00000361198 NF2P35240 595 aa24.26■■□□□ 1.47
LDB1-201ENST00000361198 ZACNQ401N2 412 aa24.26■■□□□ 1.47
LDB1-201ENST00000361198 LRIG3Q6UXM1 1119 aa24.26■■□□□ 1.47
LDB1-201ENST00000361198 ATP6V1G3Q96LB4 118 aa24.26■■□□□ 1.47
LDB1-201ENST00000361198 TTC7AQ9ULT0 858 aaPredicted RBP24.26■■□□□ 1.47
LDB1-201ENST00000361198 KIAA0391O15091 583 aaKnown RBP24.25■■□□□ 1.47
LDB1-201ENST00000361198 ZC3H11AO75152 810 aaKnown RBP eCLIP24.25■■□□□ 1.474e-16■■□□□ 14.4
LDB1-201ENST00000361198 CALCAP01258 141 aa24.25■■□□□ 1.47
LDB1-201ENST00000361198 C4BPAP04003 597 aaKnown RBP24.25■■□□□ 1.47
LDB1-201ENST00000361198 SCP2P22307 547 aa24.25■■□□□ 1.47
LDB1-201ENST00000361198 HSDL1Q3SXM5 330 aa24.25■■□□□ 1.47
LDB1-201ENST00000361198 TDRD10Q5VZ19 366 aaKnown RBP24.25■■□□□ 1.47
LDB1-201ENST00000361198 SLFN12LQ6IEE8 588 aa24.25■■□□□ 1.47
LDB1-201ENST00000361198 ALG3Q92685 438 aa24.25■■□□□ 1.47
LDB1-201ENST00000361198 CARD9Q9H257 536 aa24.25■■□□□ 1.47
LDB1-201ENST00000361198 C1orf112Q9NSG2 853 aa24.25■■□□□ 1.47
LDB1-201ENST00000361198 HMGB1P1B2RPK0 211 aaPredicted RBP24.24■■□□□ 1.47
LDB1-201ENST00000361198 GRIN3BO60391 1043 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 MAFO75444 373 aaPredicted RBP24.24■■□□□ 1.47
LDB1-201ENST00000361198 KRT5P13647 590 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 YBX3P16989 372 aaKnown RBP eCLIP24.24■■□□□ 1.47
LDB1-201ENST00000361198 PPIL2Q13356 520 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 PDCLQ13371 301 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 C11orf63Q6NUN7 778 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 PPM1EQ8WY54 764 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 OPTNQ96CV9 577 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 MSTO1Q9BUK6 570 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 SLITRK6Q9H5Y7 841 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 RBAKQ9NYW8 714 aaPredicted RBP24.24■■□□□ 1.47
LDB1-201ENST00000361198 MCM3APO60318 1980 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 A0A0B4J269 797 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 HLA-DRAP01903 254 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 MARK3P27448 753 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 ENOSF1Q7L5Y1 443 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 TRIM50Q86XT4 487 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 SEC14L1Q92503 715 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 RNPC3Q96LT9 517 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms