RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 JAK1P23458 1154 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 CCDC144BQ3MJ40 725 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 ARMCX4Q5H9R4 360 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 ANKRD7Q92527 254 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 CATSPER2Q96P56 530 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 SMG5Q9UPR3 1016 aaKnown RBP13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 RNF123Q5XPI4 1314 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 MTFR1Q15390 333 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 FASTKD1Q53R41 847 aaKnown RBP13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 WLSQ5T9L3 541 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 PDXDC2PQ6P474 469 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 CYBBP04839 570 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 S100A9P06702 114 aaKnown RBP13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 PLCG1P19174 1290 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 THEMIS2Q5TEJ8 643 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 ARL10Q8N8L6 244 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 SPATA4Q8NEY3 305 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 CABLES1Q8TDN4 633 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 ZFATQ9P243 1243 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 ALDH1A2O94788 518 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 CD58P19256 250 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 NUP107P57740 925 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 UGP2Q16851 508 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 USP17L12C9JPN9 530 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 USP17L21D6R901 530 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 DHX34Q14147 1143 aaKnown RBP13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 MAPRE1Q15691 268 aaKnown RBP13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 PRPF39Q86UA1 669 aaKnown RBP13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 ZBTB38Q8NAP3 1195 aaPredicted RBP13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 AP3M2P53677 418 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 PRKG1Q13976 671 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 OR6B2Q6IFH4 312 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 FGD2Q7Z6J4 655 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 EMILIN3Q9NT22 766 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 ITGB1BP2Q9UKP3 347 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 BIVM-ERCC5R4GMW8 1640 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 MMP1P03956 469 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 TCN1P20061 433 aaPredicted RBP13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 GPC5P78333 572 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 EFL1Q7Z2Z2 1120 aaKnown RBP13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 AHI1Q8N157 1196 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 KRT78Q8N1N4 520 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 ZNF786Q8N393 782 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 SDR42E1Q8WUS8 393 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 AIPL1Q9NZN9 384 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 FAM153AQ9UHL3 310 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 HSD17B4P51659 736 aa13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 USP13Q92995 863 aaPredicted RBP13.88□□□□□ -0.19
SRGAP3-201ENST00000360413 PSMC6P62333 389 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 ZNF211Q13398 564 aaPredicted RBP13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 ARL6IP4Q66PJ3 421 aaKnown RBP13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 LRRC47Q8N1G4 583 aaKnown RBP13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 FAM210AQ96ND0 272 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 DNAJC7Q99615 494 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 SPATA2Q9UM82 520 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 SPACA6W5XKT8 324 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 USP19O94966 1318 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 LINC00854A0A1B0GVQ3 168 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 RNF103O00237 685 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 ATP1A4Q13733 1029 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 SH3BP5LQ7L8J4 393 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 OSCP1Q8WVF1 389 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 PRRG3Q9BZD7 231 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 SPDYE5A6NIY4 337 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 TYK2P29597 1187 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 NLRP11P59045 1033 aaKnown RBP13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 STAT4Q14765 748 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 SPDYE7PQ495Y7 208 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 MFSD4BQ5TF39 518 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 LRIG3Q6UXM1 1119 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 NT5DC4Q86YG4 428 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 MICALL2Q8IY33 904 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 NXF1Q9UBU9 619 aaKnown RBP13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 KIAA0232Q92628 1395 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 LRRC53A6NM62 1247 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 LGALS16A8MUM7 142 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 C11orf88Q6PI97 169 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 OR8H2Q8N162 312 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 WDR24Q96S15 920 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 EPS8L2Q9H6S3 715 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 SHROOM2Q13796 1616 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 TAF4O00268 1085 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 CAND2O75155 1236 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 IRAK1P51617 712 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 CUL4AQ13619 759 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 HEATR6Q6AI08 1181 aaKnown RBP13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 ARHGAP27Q6ZUM4 889 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 FAM9CQ8IZT9 166 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 LRRC1Q9BTT6 524 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 STN1Q9H668 368 aaKnown RBP13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 AIM2O14862 343 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 FAM200BP0CF97 657 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 UNC45AQ9H3U1 944 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 MBD2Q9UBB5 411 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 TJP2Q9UDY2 1190 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 COL17A1Q9UMD9 1497 aaPredicted RBP13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 POTEFA5A3E0 1075 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 KCNV1Q6PIU1 500 aa13.87□□□□□ -0.19
SRGAP3-201ENST00000360413 TMEM35BQ8NCS4 154 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms