RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 SELENOSQ9BQE4 189 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 MIS12Q9H081 205 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 NHEJ1Q9H9Q4 299 aaPredicted RBP9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 PPP1R3GB7ZBB8 358 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 TBC1D12O60347 775 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 ENTPD3O75355 529 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 MYBP10242 640 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 MMP13P45452 471 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 RXRGP48443 463 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 ARFIP2P53365 341 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 SNAP25P60880 206 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 IGBP1P78318 339 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 TRIM14Q14142 442 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 ARHGEF6Q15052 776 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 ZYXQ15942 572 aaKnown RBP9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 PARP6Q2NL67 630 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 WDR72Q3MJ13 1102 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 C6orf183Q5T699 404 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 PNMA1Q8ND90 353 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 DHX36Q9H2U1 1008 aaKnown RBP9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 RETREG1Q9H6L5 497 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 RXFP1Q9HBX9 757 aa9.95□□□□□ -0.82
SMARCAL1-202ENST00000358207 GRIA2P42262 883 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 CCR3P51677 355 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 NEK3P51956 506 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 ARPC4P59998 168 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 MEA1Q16626 185 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 KHDC1Q4VXA5 237 aaKnown RBP9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 TMEM214Q6NUQ4 689 aaKnown RBP9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 TRIM67Q6ZTA4 783 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 SLC7A5P1Q8MH63 180 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 TMCO5AQ8N6Q1 288 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 ZNF713Q8N859 430 aaPredicted RBP9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 CXorf38Q8TB03 319 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 RIN3Q8TB24 985 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 DIS3LQ8TF46 1054 aaKnown RBP9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 FAM151AQ8WW52 585 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 IRGQQ8WZA9 623 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 RAB3IPQ96QF0 476 aaPredicted RBP9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 TCHPQ9BT92 498 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 ISCUQ9H1K1 167 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 CCDC134Q9H6E4 229 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 FAM114A2Q9NRY5 505 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 AGPAT5Q9NUQ2 364 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 FGFR1OP2Q9NVK5 253 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 ITGB1BP2Q9UKP3 347 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 LUC7L2Q9Y383 392 aaKnown RBP9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 SMIM23A6NLE4 172 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 GJB6O95452 261 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 SLC16A2P36021 539 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 TCF7P36402 384 aaPredicted RBP9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 CDK7P50613 346 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 BRCA2P51587 3418 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 PMS2P54278 862 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 RNASE9P60153 205 aaKnown RBP9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 PPATQ06203 517 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 FOXD4Q12950 439 aaPredicted RBP9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 MOGSQ13724 837 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 GIT2Q14161 759 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 KLHL35Q6PF15 583 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 C3orf62Q6ZUJ4 267 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 PEX5LQ8IYB4 626 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 SRBD1Q8N5C6 995 aaKnown RBP9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 GAB3Q8WWW8 586 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 SHISA4Q96DD7 197 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 IQCDQ96DY2 449 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 DYDC2Q96IM9 177 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 MAML3Q96JK9 1138 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 SH2D4AQ9H788 454 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 CLIC5Q9NZA1 410 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 RASAL2Q9UJF2 1139 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 PTPN22Q9Y2R2 807 aa9.94□□□□□ -0.82
SMARCAL1-202ENST00000358207 OXSR1O95747 527 aaPredicted RBP9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 PABPC4LP0CB38 370 aaKnown RBP9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 LIFRP42702 1097 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 UBXN1Q04323 297 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 TROAPQ12815 778 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 TRIM29Q14134 588 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 MAP7Q14244 749 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 POTEEQ6S8J3 1075 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 USP49Q70CQ1 688 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 LRRC8CQ8TDW0 803 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 CEP295NLQ96MC4 621 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 ZNF408Q9H9D4 720 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 INTS9Q9NV88 658 aaKnown RBP9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 FAIMQ9NVQ4 179 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 ZNF148Q9UQR1 794 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 SNCAIPQ9Y6H5 919 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 TMEM110-MUSTN1A8MSY1 372 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 WDR46O15213 610 aaKnown RBP9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 PRPF3O43395 683 aaKnown RBP9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 PLEKP08567 350 aaPredicted RBP9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 CFAP221Q4G0U5 840 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 DCAF15Q66K64 600 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 LRRC8BQ6P9F7 803 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 MARK2Q7KZI7 788 aaKnown RBP9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 SGMS1Q86VZ5 419 aa9.93□□□□□ -0.82
SMARCAL1-202ENST00000358207 TRIM22Q8IYM9 498 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms