RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 CCDC137Q6PK04 289 aaKnown RBP10.63□□□□□ -0.71
RNF40-202ENST00000357890 ANKRD35Q8N283 1001 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 FAM81AQ8TBF8 368 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 CHURC1Q8WUH1 139 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 JDP2Q8WYK2 163 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 ZNF653Q96CK0 615 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 C18orf8Q96DM3 657 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 NACC1Q96RE7 527 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 GORASP1Q9BQQ3 440 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 ZNF577Q9BSK1 485 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 INTS2Q9H0H0 1204 aaKnown RBP10.63□□□□□ -0.71
RNF40-202ENST00000357890 GANQ9H2C0 597 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 NPHS2Q9NP85 383 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 HOMER2Q9NSB8 354 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 TRAF3IP3Q9Y228 551 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 USTQ9Y2C2 406 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 ECEL1O95672 775 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 SLC12A3P55017 1021 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 MARSP56192 900 aaKnown RBP10.63□□□□□ -0.71
RNF40-202ENST00000357890 CLUL1Q15846 466 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 POTEAQ6S8J7 498 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 ST13P4Q8IZP2 240 aaPredicted RBP10.63□□□□□ -0.71
RNF40-202ENST00000357890 ARHGAP24Q8N264 748 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 PIP4K2CQ8TBX8 421 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 SLC35C1Q96A29 364 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 C9orf72Q96LT7 481 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 STK33Q9BYT3 514 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 KCTD10Q9H3F6 313 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 EBF2Q9HAK2 575 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.63□□□□□ -0.71
RNF40-202ENST00000357890 UBN1Q9NPG3 1134 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 ALG6Q9Y672 507 aa10.63□□□□□ -0.71
RNF40-202ENST00000357890 EXOC1LA0A1B0GW35 172 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 GAS8O95995 478 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 ATF2P15336 505 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 SERPINB6P35237 376 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 PSMC4P43686 418 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 APOBEC3HQ6NTF7 200 aaKnown RBP10.62□□□□□ -0.71
RNF40-202ENST00000357890 TLDC1Q6P9B6 456 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 RHOT2Q8IXI1 618 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 C4orf33Q8N1A6 199 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 C1orf54Q8WWF1 131 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 NMD3Q96D46 503 aaKnown RBP10.62□□□□□ -0.71
RNF40-202ENST00000357890 WDR11Q9BZH6 1224 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 RNPEPL1Q9HAU8 725 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 SLC5A4Q9NY91 659 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 CTNNAL1Q9UBT7 734 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 ATF5Q9Y2D1 282 aaPredicted RBP10.62□□□□□ -0.71
RNF40-202ENST00000357890 TRPA1O75762 1119 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 RTN3O95197 1032 aaPredicted RBP10.62□□□□□ -0.71
RNF40-202ENST00000357890 POTEJP0CG39 1038 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 DLATP10515 647 aaKnown RBP10.62□□□□□ -0.71
RNF40-202ENST00000357890 CALB2P22676 271 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 PTDSS1P48651 473 aaKnown RBP10.62□□□□□ -0.71
RNF40-202ENST00000357890 NOVP48745 357 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 SGO2Q562F6 1265 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 PPP1R21Q6ZMI0 780 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 ZNF572Q7Z3I7 529 aaPredicted RBP10.62□□□□□ -0.71
RNF40-202ENST00000357890 LRRC4BQ9NT99 713 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 MRPL11Q9Y3B7 192 aaKnown RBP10.62□□□□□ -0.71
RNF40-202ENST00000357890 CYP3A7-CYP3A51PA0A087WV96 503 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 A0A1B0GVG6 124 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 H0YIN7 160 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 ZBTB39O15060 712 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 MSH4O15457 936 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 ATMINO43313 823 aaPredicted RBP10.62□□□□□ -0.71
RNF40-202ENST00000357890 DCTN3O75935 186 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 LINGO3P0C6S8 592 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 CYP3A7P24462 503 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 SREBF1P36956 1147 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 OVGP1Q12889 678 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 COG2Q14746 738 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 CHADLQ6NUI6 762 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 MIER3Q7Z3K6 550 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 NT5DC3Q86UY8 548 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 MYLK4Q86YV6 388 aaPredicted RBP10.62□□□□□ -0.71
RNF40-202ENST00000357890 AGGF1Q8N302 714 aaeCLIP10.62□□□□□ -0.71
RNF40-202ENST00000357890 OGFOD1Q8N543 542 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 RBM46Q8TBY0 533 aaKnown RBP10.62□□□□□ -0.71
RNF40-202ENST00000357890 MASTLQ96GX5 879 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 EPAS1Q99814 870 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 APEX2Q9UBZ4 518 aa10.62□□□□□ -0.71
RNF40-202ENST00000357890 RARAP10276 462 aa10.61□□□□□ -0.71
RNF40-202ENST00000357890 BTKQ06187 659 aa10.61□□□□□ -0.71
RNF40-202ENST00000357890 Q4G0T1 1027 aa10.61□□□□□ -0.71
RNF40-202ENST00000357890 ARSHQ5FYA8 562 aa10.61□□□□□ -0.71
RNF40-202ENST00000357890 SNX30Q5VWJ9 437 aa10.61□□□□□ -0.71
RNF40-202ENST00000357890 CC2D2BQ6DHV5 1058 aa10.61□□□□□ -0.71
RNF40-202ENST00000357890 STK32AQ8WU08 396 aa10.61□□□□□ -0.71
RNF40-202ENST00000357890 KIFAP3Q92845 792 aa10.61□□□□□ -0.71
RNF40-202ENST00000357890 FAM118BQ9BPY3 351 aa10.61□□□□□ -0.71
RNF40-202ENST00000357890 TEKT3Q9BXF9 490 aa10.61□□□□□ -0.71
RNF40-202ENST00000357890 MOV10L1Q9BXT6 1211 aaKnown RBP10.61□□□□□ -0.71
RNF40-202ENST00000357890 CARD9Q9H257 536 aa10.61□□□□□ -0.71
RNF40-202ENST00000357890 TDRD3Q9H7E2 651 aaKnown RBP10.61□□□□□ -0.71
RNF40-202ENST00000357890 RXFP1Q9HBX9 757 aa10.61□□□□□ -0.71
RNF40-202ENST00000357890 ANAPC5Q9UJX4 755 aa10.61□□□□□ -0.71
RNF40-202ENST00000357890 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.61□□□□□ -0.71
RNF40-202ENST00000357890 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.61□□□□□ -0.71
RNF40-202ENST00000357890 SYNGAP1Q96PV0 1343 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms