RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 TTC33Q6PID6 262 aaPredicted RBP13.53□□□□□ -0.24
SMC4-202ENST00000357388 ANKS3Q6ZW76 656 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 ABHD8Q96I13 439 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 CHAMP1Q96JM3 812 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 OLFM1Q99784 485 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 SLC7A5P2Q9GIP4 190 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 C2orf40Q9H1Z8 148 aa13.53□□□□□ -0.24
SMC4-202ENST00000357388 ATF5Q9Y2D1 282 aaPredicted RBP13.53□□□□□ -0.24
SMC4-202ENST00000357388 ESYT3A0FGR9 886 aa13.52□□□□□ -0.24
SMC4-202ENST00000357388 ADD2P35612 726 aa13.52□□□□□ -0.24
SMC4-202ENST00000357388 PURAQ00577 322 aaKnown RBP13.52□□□□□ -0.24
SMC4-202ENST00000357388 CNGA2Q16280 664 aa13.52□□□□□ -0.24
SMC4-202ENST00000357388 TWF2Q6IBS0 349 aaKnown RBP13.52□□□□□ -0.24
SMC4-202ENST00000357388 P3H2Q8IVL5 708 aa13.52□□□□□ -0.24
SMC4-202ENST00000357388 YAF2Q8IY57 180 aa13.52□□□□□ -0.24
SMC4-202ENST00000357388 MAD2L2Q9UI95 211 aa13.52□□□□□ -0.24
SMC4-202ENST00000357388 NR3C1P04150 777 aa13.52□□□□□ -0.24
SMC4-202ENST00000357388 ATP1A1P05023 1023 aaKnown RBP13.52□□□□□ -0.24
SMC4-202ENST00000357388 CSTF3Q12996 717 aaKnown RBP13.52□□□□□ -0.24
SMC4-202ENST00000357388 VEPH1Q14D04 833 aa13.52□□□□□ -0.24
SMC4-202ENST00000357388 PPP6R3Q5H9R7 873 aaPredicted RBP13.52□□□□□ -0.24
SMC4-202ENST00000357388 RFX8Q6ZV50 586 aa13.52□□□□□ -0.24
SMC4-202ENST00000357388 SNRNP27Q8WVK2 155 aaKnown RBP13.52□□□□□ -0.24
SMC4-202ENST00000357388 ARHGEF1Q92888 912 aaKnown RBP13.52□□□□□ -0.24
SMC4-202ENST00000357388 UBTFL6P0CB48 400 aaPredicted RBP13.52□□□□□ -0.25
SMC4-202ENST00000357388 SDC4P31431 198 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 WASHC5Q12768 1159 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 SKIV2LQ15477 1246 aaKnown RBP13.52□□□□□ -0.25
SMC4-202ENST00000357388 ARMCX4Q5H9R4 360 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 HNRNPLLQ8WVV9 542 aaKnown RBP13.52□□□□□ -0.25
SMC4-202ENST00000357388 EGFL8Q99944 293 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 FANCEQ9HB96 536 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 DYRK4Q9NR20 520 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 CDYLQ9Y232 598 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 ALBP02768 609 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 INAQ16352 499 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 NDUFA5Q16718 116 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 CDO1Q16878 200 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 SCN4BQ8IWT1 228 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 XXYLT1Q8NBI6 393 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 OSBPL8Q9BZF1 889 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 KLHL25Q9H0H3 589 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 TBC1D22BQ9NU19 505 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 APPL1Q9UKG1 709 aa13.52□□□□□ -0.25
SMC4-202ENST00000357388 NUP62P37198 522 aaPredicted RBP13.51□□□□□ -0.25
SMC4-202ENST00000357388 CYB5D1Q6P9G0 228 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 SCARA5Q6ZMJ2 495 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 APOBEC3FQ8IUX4 373 aaKnown RBP13.51□□□□□ -0.25
SMC4-202ENST00000357388 NPHS2Q9NP85 383 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 ZFATQ9P243 1243 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 DNAJC5BQ9UF47 199 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 KCNH4Q9UQ05 1017 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 DTNAQ9Y4J8 743 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 ITIH6Q6UXX5 1313 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 MXD4Q14582 209 aaPredicted RBP13.51□□□□□ -0.25
SMC4-202ENST00000357388 TTLL4Q14679 1199 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 PTGISQ16647 500 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 KBTBD12Q3ZCT8 623 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 FMR1NBQ8N0W7 255 aaPredicted RBP13.51□□□□□ -0.25
SMC4-202ENST00000357388 RASGRP4Q8TDF6 673 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 DDX50Q9BQ39 737 aaKnown RBP13.51□□□□□ -0.25
SMC4-202ENST00000357388 ZSCAN32Q9NX65 697 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 H2AFY2Q9P0M6 372 aaPredicted RBP13.51□□□□□ -0.25
SMC4-202ENST00000357388 MBD2Q9UBB5 411 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 FEM1BQ9UK73 627 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 ASAP1Q9ULH1 1129 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 MYOM2P54296 1465 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 IGF2BP3O00425 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMC4-202ENST00000357388 DYNLL1P63167 89 aaKnown RBP13.51□□□□□ -0.25
SMC4-202ENST00000357388 RASGRF1Q13972 1273 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 AARS2Q5JTZ9 985 aaKnown RBP13.51□□□□□ -0.25
SMC4-202ENST00000357388 MIGA2Q7L4E1 593 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 AGBL1Q96MI9 1066 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 CATSPER2Q96P56 530 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 PPP1R2P1Q96PQ5 205 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 THTPAQ9BU02 230 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 TTC7AQ9ULT0 858 aaPredicted RBP13.51□□□□□ -0.25
SMC4-202ENST00000357388 CLDN3O15551 220 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 KCNQ3O43525 872 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 NCK2O43639 380 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 CD2BP2O95400 341 aaKnown RBP13.51□□□□□ -0.25
SMC4-202ENST00000357388 FDX1P10109 184 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 AP3M2P53677 418 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 VCPP55072 806 aaKnown RBP13.51□□□□□ -0.25
SMC4-202ENST00000357388 BCAR1P56945 870 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 KCNH2Q12809 1159 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 CCDC144BQ3MJ40 725 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 RBBP8Q99708 897 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 BBS2Q9BXC9 721 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 SOX13Q9UN79 622 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 CDY2AQ9Y6F7 541 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 CDY1Q9Y6F8 540 aa13.51□□□□□ -0.25
SMC4-202ENST00000357388 B2RBV5 119 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 C5orf58C9J3I9 102 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 USP1O94782 785 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 TRIM49P0CI25 452 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 TRIM49CP0CI26 452 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 ADORA1P30542 326 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 IRAK1P51617 712 aa13.5□□□□□ -0.25
SMC4-202ENST00000357388 KRT76Q01546 638 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms