RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 RIBC1Q8N443 379 aaPredicted RBP12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 KCTD17Q8N5Z5 321 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 TTC8Q8TAM2 541 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 FBXO41Q8TF61 875 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 TRAPPC9Q96Q05 1148 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 PHTF1Q9UMS5 762 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 EDF1O60869 148 aaKnown RBP12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 CYP1A2P05177 515 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 GZMAP12544 262 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 GABPAQ06546 454 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 FOXB2Q5VYV0 432 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 SEPT14Q6ZU15 432 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 CPNE8Q86YQ8 564 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 DRAXINQ8NBI3 349 aaPredicted RBP12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 NYXQ9GZU5 481 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 UBN1Q9NPG3 1134 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 NMRK1Q9NWW6 199 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 STK24Q9Y6E0 443 aa12.93□□□□□ -0.34
SMARCAL1-201ENST00000357276 UBE4BO95155 1302 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 MEIS1O00470 390 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 PDHA1P08559 390 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 ABHD2P08910 425 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 GCAP28676 217 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 BTDP43251 543 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 MESDQ14696 234 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 STAT4Q14765 748 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 SRRM1Q8IYB3 904 aaKnown RBP12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 ANKRD35Q8N283 1001 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 PHC3Q8NDX5 983 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 ERMNQ8TAM6 284 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 VTI1AQ96AJ9 217 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 PCDHB18PQ96TA0 734 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 GLT8D2Q9H1C3 349 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 GPCPD1Q9NPB8 672 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 GRID1Q9ULK0 1009 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 LRCH1Q9Y2L9 728 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 ENTPD5O75356 428 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 PTPN4P29074 926 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 TM4SF1P30408 202 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 RASSF2P50749 326 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 ITGA8P53708 1063 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 C4orf50Q6ZRC1 276 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 TRAIPQ9BWF2 469 aa12.92□□□□□ -0.34
SMARCAL1-201ENST00000357276 HNRNPCL1O60812 293 aaKnown RBP12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 TNIP1Q15025 636 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 PDK4Q16654 411 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 SLC45A4Q5BKX6 768 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 FAM47EQ6ZV65 393 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 TRABD2AQ86V40 505 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 LRRC47Q8N1G4 583 aaKnown RBP12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 UIMC1Q96RL1 719 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 POLR3CQ9BUI4 534 aaPredicted RBP12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 ANO3Q9BYT9 981 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 SAR1AQ9NR31 198 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 NOCTQ9UK39 431 aaKnown RBP12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 VAV3Q9UKW4 847 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 HGSO14964 777 aaPredicted RBP12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 THAP12O43422 761 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 GSTA2P09210 222 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 MYL7Q01449 175 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 COG2Q14746 738 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 TTBK2Q6IQ55 1244 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 RINT1Q6NUQ1 792 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 TDRPQ86YL5 185 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 KIFAP3Q92845 792 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 P2RX7Q99572 595 aaKnown RBP12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 MIPEPQ99797 713 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 USP17L15C9J2P7 530 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 USP17L13C9JLJ4 530 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 USP17L11C9JVI0 530 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 USP17L18D6R9N7 530 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 USP17L22D6RA61 530 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 USP17L17D6RBQ6 530 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 USP17L19D6RCP7 530 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 USP17L20D6RJB6 530 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 NVLO15381 856 aaKnown RBP12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 VHLP40337 213 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 USP17L24Q0WX57 530 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 NR1H3Q13133 447 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 CCDC142Q17RM4 750 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 USP17L6PQ6QN14 398 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 SLC9A9Q8IVB4 645 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 LARGE2Q8N3Y3 721 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 TMEM174Q8WUU8 243 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 UCMAQ8WVF2 138 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 NRG4Q8WWG1 115 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 SPOCK2Q92563 424 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 BICD1Q96G01 975 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 NUMBLQ9Y6R0 609 aa12.91□□□□□ -0.34
SMARCAL1-201ENST00000357276 TMEM110-MUSTN1A8MSY1 372 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 C2CD2LO14523 706 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 RNF8O76064 485 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 TRIM49P0CI25 452 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 TRIM49CP0CI26 452 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 DLATP10515 647 aaKnown RBP12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 MARK3P27448 753 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 MAN1A1P33908 653 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 RFC5P40937 340 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 DNAJC3Q13217 504 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms