RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 HDAC6Q9UBN7 1215 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 HPS5Q9UPZ3 1129 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 TMEM253P0C7T8 217 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 RFC5P40937 340 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 VSNL1P62760 191 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 IL1RL1Q01638 556 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 KRT17Q04695 432 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 PIGHQ14442 188 aaPredicted RBP12.42□□□□□ -0.42
COL9A1-202ENST00000357250 DEFB132Q7Z7B7 95 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 ZBED8Q8IZ13 594 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 CATSPER1Q8NEC5 780 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 URGCPQ8TCY9 931 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 DPF2Q92785 391 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 SH2D3AQ9BRG2 576 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 SLC13A4Q9UKG4 626 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 NEURL4Q96JN8 1562 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 SMIM22K7EJ46 135 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 MUTP22033 750 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 SERPINB9P50453 376 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 ICE2Q659A1 982 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 CCNI2Q6ZMN8 369 aaPredicted RBP12.42□□□□□ -0.42
COL9A1-202ENST00000357250 FRA10AC1Q70Z53 315 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 ANO5Q75V66 913 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 RHPN2Q8IUC4 686 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 RIBC1Q8N443 379 aaPredicted RBP12.42□□□□□ -0.42
COL9A1-202ENST00000357250 SPDYE1Q8NFV5 336 aaPredicted RBP12.42□□□□□ -0.42
COL9A1-202ENST00000357250 KRT35Q92764 455 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 TEX13BQ9BXU2 312 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 HSPBP1Q9NZL4 362 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 ARL2BPQ9Y2Y0 163 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 FIS1Q9Y3D6 152 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 APOL1O14791 398 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 TMCC1O94876 653 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 EEF1B2P24534 225 aaKnown RBP12.42□□□□□ -0.42
COL9A1-202ENST00000357250 LAMB3Q13751 1172 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 TC2NQ8N9U0 490 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 GTF3C2Q8WUA4 911 aaPredicted RBP12.42□□□□□ -0.42
COL9A1-202ENST00000357250 N4BP2L2Q92802 583 aaPredicted RBP12.42□□□□□ -0.42
COL9A1-202ENST00000357250 C18orf8Q96DM3 657 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 SAAL1Q96ER3 474 aa12.42□□□□□ -0.42
COL9A1-202ENST00000357250 TRPA1O75762 1119 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 RPA1P27694 616 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 STAT5BP51692 787 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 ARPP19P56211 112 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 UGP2Q16851 508 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 C1orf146Q5VVC0 180 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 SH3TC2Q8TF17 1288 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 PSD3Q9NYI0 1048 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 LMCD1Q9NZU5 365 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 ESYT3A0FGR9 886 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 PIK3R2O00459 728 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 MAGEB2O15479 319 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 MYL3P08590 195 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 MDH1P40925 334 aaKnown RBP12.41□□□□□ -0.42
COL9A1-202ENST00000357250 GALCP54803 685 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 CDH6P55285 790 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 FMR1Q06787 632 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL9A1-202ENST00000357250 COG2Q14746 738 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 SGSM1Q2NKQ1 1148 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 HNRNPLLQ8WVV9 542 aaKnown RBP12.41□□□□□ -0.42
COL9A1-202ENST00000357250 EPAS1Q99814 870 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 C17orf75Q9HAS0 396 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 KRT82Q9NSB4 513 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 SUCLA2Q9P2R7 463 aaPredicted RBP12.41□□□□□ -0.42
COL9A1-202ENST00000357250 AMACRQ9UHK6 382 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 A8MXQ7 604 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 HDLBPQ00341 1268 aaKnown RBP12.41□□□□□ -0.42
COL9A1-202ENST00000357250 CDK17Q00537 523 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 ZNF746Q6NUN9 644 aaPredicted RBP12.41□□□□□ -0.42
COL9A1-202ENST00000357250 MMGT1Q8N4V1 131 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL9A1-202ENST00000357250 PPP1R16BQ96T49 567 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 MMP19Q99542 508 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 SENP7Q9BQF6 1050 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 FAM217BQ9NTX9 383 aaPredicted RBP12.41□□□□□ -0.42
COL9A1-202ENST00000357250 PCSK1NQ9UHG2 260 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 DDX5P17844 614 aaKnown RBP12.41□□□□□ -0.42
COL9A1-202ENST00000357250 HSD17B4P51659 736 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 ARSEP51690 589 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 ACTR2P61160 394 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 SLC12A1Q13621 1099 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 MOXD1Q6UVY6 613 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 MTBPQ96DY7 904 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 SPATA33Q96N06 139 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 EPN3Q9H201 632 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 ETNK1Q9HBU6 452 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 PRKAG2Q9UGJ0 569 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 TTC7AQ9ULT0 858 aaPredicted RBP12.41□□□□□ -0.42
COL9A1-202ENST00000357250 PCDHB2Q9Y5E7 798 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 CNTNAP5Q8WYK1 1306 aa12.41□□□□□ -0.42
COL9A1-202ENST00000357250 TYK2P29597 1187 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 PPP4CP60510 307 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 RBP5P82980 135 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 EFHBQ8N7U6 833 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 PARD3BQ8TEW8 1205 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 LRRC1Q9BTT6 524 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 ANKEF1Q9NU02 776 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 COL5A2P05997 1499 aaPredicted RBP12.4□□□□□ -0.42
COL9A1-202ENST00000357250 ARHGAP23Q9P227 1491 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 NDUFB10O96000 172 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms