RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 NCALDP61601 193 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 COASYQ13057 564 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 TMEM132DQ14C87 1099 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 TRIM60Q495X7 471 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 FASTKD1Q53R41 847 aaKnown RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 FAM133BQ5BKY9 247 aaKnown RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 SUSD4Q5VX71 490 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 PLEKHM3Q6ZWE6 761 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 FMR1NBQ8N0W7 255 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 TRIML2Q8N7C3 387 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 ZNF512Q96ME7 567 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 SIK2Q9H0K1 926 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 DHX35Q9H5Z1 703 aaKnown RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 MAD2L2Q9UI95 211 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 CDHR2Q9BYE9 1310 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 ANO9A1A5B4 782 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 LRRIQ3A6PVS8 624 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 TCF3P15923 654 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 PPP3CCP48454 512 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 KCNQ4P56696 695 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 GPC5P78333 572 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 ZNF394Q53GI3 561 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 B4GALNT2Q8NHY0 566 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 TTC17Q96AE7 1141 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 PPARGC1AQ9UBK2 798 aaKnown RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 COPG1Q9Y678 874 aaKnown RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 SPACA6W5XKT8 324 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 H7C4K7 107 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 CHUKO15111 745 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 KRT16P08779 473 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 C6orf222P0C671 652 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 GCLMP48507 274 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 ALKBH5Q6P6C2 394 aaKnown RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 ZFP69BQ9UJL9 534 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 PPRC1Q5VV67 1664 aaKnown RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 C19orf81C9J6K1 198 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 APOA4P06727 396 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 STAG3L1P0CL83 205 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 IMPDH2P12268 514 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 ABCE1P61221 599 aaKnown RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 IFT88Q13099 833 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 P3H1Q32P28 736 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 ZNF513Q8N8E2 541 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 C3orf20Q8ND61 904 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 UCMAQ8WVF2 138 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 AP1M1Q9BXS5 423 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 ACTR5Q9H9F9 607 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 RBAKQ9NYW8 714 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 ATXN2Q99700 1313 aaKnown RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 SLC16A3O15427 465 aaKnown RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 VCLP18206 1134 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 NR5A1Q13285 461 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 ADCK5Q3MIX3 580 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 TMEM259Q4ZIN3 620 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 GRAMD1CQ8IYS0 662 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 KRT35Q92764 455 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 SNF8Q96H20 258 aa5.84□□□□□ -1.47
PTPRD-202ENST00000356435 TSEN34Q9BSV6 310 aaKnown RBP5.84□□□□□ -1.47
PTPRD-202ENST00000356435 METP08581 1390 aa5.84□□□□□ -1.48
PTPRD-202ENST00000356435 IRF1P10914 325 aa5.84□□□□□ -1.48
PTPRD-202ENST00000356435 LIG3P49916 1009 aa5.84□□□□□ -1.48
PTPRD-202ENST00000356435 VAMP7P51809 220 aa5.84□□□□□ -1.48
PTPRD-202ENST00000356435 CACNB2Q08289 660 aaPredicted RBP5.84□□□□□ -1.48
PTPRD-202ENST00000356435 C16orf87Q6PH81 154 aa5.84□□□□□ -1.48
PTPRD-202ENST00000356435 SP8Q8IXZ3 490 aa5.84□□□□□ -1.48
PTPRD-202ENST00000356435 OTULINQ96BN8 352 aa5.84□□□□□ -1.48
PTPRD-202ENST00000356435 MED15Q96RN5 788 aa5.84□□□□□ -1.48
PTPRD-202ENST00000356435 TRAF3IP3Q9Y228 551 aa5.84□□□□□ -1.48
PTPRD-202ENST00000356435 RASSF10A6NK89 507 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 SUPT3HB4E1H0 165 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 ANGPT2O15123 496 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 DYRK3O43781 588 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 LARGE1O95461 756 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 TFRCP02786 760 aaKnown RBP5.83□□□□□ -1.48
PTPRD-202ENST00000356435 CDH2P19022 906 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-202ENST00000356435 HMOX2P30519 316 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 SEMA3FQ13275 785 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 PDAP1Q13442 181 aaKnown RBP5.83□□□□□ -1.48
PTPRD-202ENST00000356435 PFKFB3Q16875 520 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-202ENST00000356435 PLEKHA8Q96JA3 519 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 TDRD3Q9H7E2 651 aaKnown RBP5.83□□□□□ -1.48
PTPRD-202ENST00000356435 ENTPD7Q9NQZ7 604 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 INTUQ9ULD6 942 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 STK36Q9NRP7 1315 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 POTEMA6NI47 508 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 MAP3K13O43283 966 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 RNASEH1O60930 286 aaKnown RBP5.83□□□□□ -1.48
PTPRD-202ENST00000356435 IL18RAPO95256 599 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 CD4P01730 458 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 CTSHP09668 335 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 ITGA4P13612 1032 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 ZNF589Q86UQ0 364 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-202ENST00000356435 SMARCAD1Q9H4L7 1026 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 RUBCNLQ9H714 662 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 ZNRF3Q9ULT6 936 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 A0A1B0GW55 424 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 HOXA2O43364 376 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 DUX4L2P0CJ85 424 aa5.83□□□□□ -1.48
PTPRD-202ENST00000356435 DUX4L3P0CJ86 424 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms