RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 C15orf52Q6ZUT6 534 aaKnown RBP15.81■□□□□ 0.12
COL17A1-201ENST00000353479 MED1Q15648 1581 aaPredicted RBP15.8■□□□□ 0.12
COL17A1-201ENST00000353479 H3BRJ5 948 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 ATP1A1P05023 1023 aaKnown RBP15.8■□□□□ 0.12
COL17A1-201ENST00000353479 SULT1E1P49888 294 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 ZNF484Q5JVG2 852 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 SLC30A10Q6XR72 485 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 KLK14Q9P0G3 267 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 FAN1Q9Y2M0 1017 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 ITIH6Q6UXX5 1313 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 KIAA1755Q5JYT7 1200 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 SPATA24Q86W54 205 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 ABCF3Q9NUQ8 709 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 NOC2LQ9Y3T9 749 aaKnown RBP15.8■□□□□ 0.12
COL17A1-201ENST00000353479 ATP8B1O43520 1251 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 GALCP54803 685 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 CASP8Q14790 479 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 STILQ15468 1287 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 TTC30AQ86WT1 665 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 C1orf54Q8WWF1 131 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 FIS1Q9Y3D6 152 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 SART1O43290 800 aaKnown RBP15.8■□□□□ 0.12
COL17A1-201ENST00000353479 CLTAP09496 248 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 SV2CQ496J9 727 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 LBHD1Q9BQE6 289 aaPredicted RBP15.8■□□□□ 0.12
COL17A1-201ENST00000353479 TRIM62Q9BVG3 475 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 MTIF3Q9H2K0 278 aaKnown RBP15.8■□□□□ 0.12
COL17A1-201ENST00000353479 SP110Q9HB58 689 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 GAKO14976 1311 aa15.8■□□□□ 0.12
COL17A1-201ENST00000353479 RHBDL3P58872 404 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 ROR1Q01973 937 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 FKBP1CQ5VVH2 108 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 TOM1L1O75674 476 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 VTNP04004 478 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 CYP2C8P10632 490 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 KPNA2P52292 529 aaKnown RBP15.79■□□□□ 0.12
COL17A1-201ENST00000353479 USP50Q70EL3 339 aaPredicted RBP15.79■□□□□ 0.12
COL17A1-201ENST00000353479 TRIM59Q8IWR1 403 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 DNERQ8NFT8 737 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 SLC35G2Q8TBE7 412 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 NT5C1AQ9BXI3 368 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 STK25O00506 426 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 CLGNO14967 610 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 IRX4P78413 519 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 LY6KQ17RY6 165 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 EMBQ6PCB8 327 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 NOP9Q86U38 636 aaKnown RBP15.79■□□□□ 0.12
COL17A1-201ENST00000353479 ASCC2Q9H1I8 757 aaPredicted RBP15.79■□□□□ 0.12
COL17A1-201ENST00000353479 WDR91A4D1P6 747 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 MAP7Q14244 749 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 ZSCAN26Q16670 478 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 KIZQ2M2Z5 673 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 GLRA4Q5JXX5 417 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 GJB7Q6PEY0 223 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 ELOA2Q8IYF1 753 aaPredicted RBP15.79■□□□□ 0.12
COL17A1-201ENST00000353479 CYP2W1Q8TAV3 490 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 HPDLQ96IR7 371 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 CACYBPQ9HB71 228 aaKnown RBP15.79■□□□□ 0.12
COL17A1-201ENST00000353479 TRPC7Q9HCX4 862 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 IQANK1A0A1B0GTG1 560 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 ITGB3P05106 788 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 PDGFRAP16234 1089 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 PAMP19021 973 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 NFKBIAP25963 317 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 GPS1Q13098 491 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 GIT2Q14161 759 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 ZC3H18Q86VM9 953 aaKnown RBP15.79■□□□□ 0.12
COL17A1-201ENST00000353479 PDLIM2Q96JY6 352 aa15.79■□□□□ 0.12
COL17A1-201ENST00000353479 KLRC1P26715 233 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 NPTX2P47972 431 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 ALS2CLQ60I27 953 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 TRIM42Q8IWZ5 723 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 NIF3L1Q9GZT8 377 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 ESYT3A0FGR9 886 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 DFFAO00273 331 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 ZNF286BP0CG31 522 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 EIF3BP55884 814 aaKnown RBP15.78■□□□□ 0.12
COL17A1-201ENST00000353479 ACCSLQ4AC99 568 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 SMIM22K7EJ46 135 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 CHRNA3P32297 505 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 VGLL4Q14135 290 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 DHX38Q92620 1227 aaKnown RBP15.78■□□□□ 0.12
COL17A1-201ENST00000353479 MCEEQ96PE7 176 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 SEPT5Q99719 369 aaPredicted RBP15.78■□□□□ 0.12
COL17A1-201ENST00000353479 PLEKHA5Q9HAU0 1116 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 GPRC5DQ9NZD1 345 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 PLAAQ9Y263 795 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 PI4K2BG5E9Z4 385 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 NAMPTP43490 491 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 EPC2Q52LR7 807 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 CCDC137Q6PK04 289 aaKnown RBP15.78■□□□□ 0.12
COL17A1-201ENST00000353479 GSPT2Q8IYD1 628 aaKnown RBP15.78■□□□□ 0.12
COL17A1-201ENST00000353479 TJP2Q9UDY2 1190 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 PCDHB7Q9Y5E2 793 aa15.78■□□□□ 0.12
COL17A1-201ENST00000353479 SSU72P8A0A1W2PR75 194 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 GRID2IPA4D2P6 1211 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 GRAP2O75791 330 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 KRT14P02533 472 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 MUTP22033 750 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 NNMTP40261 264 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms